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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1472870-1473110
(+)
TPP
1473411-1475283 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
SGRA_1450
Operon
DOOR ID:
984188
SGRA_1449,
SGRA_1450
(thiC)
View Structure
2
1979556-1979584
(+)
PreQ1
1979669-1980368 (+)
SGRA_1965
SGRA_1965
Single gene
DOOR ID:
3443909
SGRA_1965
View Structure
3
2241892-2242002
(+)
SAM
2242303-2244100 (+)
SGRA_2223
Acyl-CoA dehydrogenase
SGRA_2223
Single gene
DOOR ID:
3443986
SGRA_2223
View Structure
4
3692644-3692763
(+)
cobalamin
3692865-3694137 (+)
SGRA_3592
SGRA_3592
Single gene
DOOR ID:
3444350
SGRA_3592
View Structure
Genome:
Saprospira grandis str. Lewin
(
NC_016940.1
);
Phylum:
Bacteroidetes/Chlorobi group
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