Genome: Gordonia polyisoprenivorans VH2 (NC_016906.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 785498-785609 (+)TPP785618-786731 (+)thiO

Putative glycine oxidase ThiO		GPOL_c06470Operon

DOOR ID: 1226805		GPOL_c06510,
GPOL_c06500,
GPOL_c06490 (thiG),
GPOL_c06480 (thiS),
GPOL_c06470 (thiO)		 View Structure
2 950537-950650 (-)TPP947985-948858 (-)thiD

Phosphomethylpyrimidine kinase ThiD 		GPOL_c08030Operon

DOOR ID: 1226836		GPOL_c08040 (thiC),
GPOL_c08030 (thiD)		 View Structure
3 1747892-1748083 (+)cobalamin1748171-1749245 (+)GPOL_c15330

Putative iron ABC transporter; permease protein		GPOL_c15330Operon

DOOR ID: 1226987		GPOL_c15330,
GPOL_c15340,
GPOL_c15350		 View Structure
4 1751072-1751280 (+)cobalamin1751395-1752436 (+)GPOL_c15360

Putative iron compound ABC transporter; substrate-binding protein		GPOL_c15360Operon

DOOR ID: 1226988		GPOL_c15360,
GPOL_c15370,
GPOL_c15380		 View Structure
5 1868158-1868278 (-)SAM-IV1866761-1868096 (-)GPOL_c16420

O-acetylhomoserine (Thiol)-lyase (9)		GPOL_c16420Operon

DOOR ID: 1227010		GPOL_c16410 (metX),
GPOL_c16420		 View Structure
6 1918030-1918164 (+)cobalamin1918197-1918419 (+)GPOL_c16900

GPOL_c16900Operon

DOOR ID: 1227024		GPOL_c16900,
GPOL_c16910		 View Structure
7 1954846-1955044 (-)cobalamin1952407-1954696 (-)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		GPOL_c17170Single gene

DOOR ID: 3427754		GPOL_c17170 (metE) View Structure
8 2239851-2239959 (+)SAM-IV2240091-2241102 (+)GPOL_c19700

Putative amino ABC transporter; permease protein		GPOL_c19700Operon

DOOR ID: 1227093		GPOL_c19700,
GPOL_c19710		 View Structure
9 2465199-2465295 (-)TPP2463798-2464428 (-)GPOL_c21710

Putative methyltransferase		GPOL_c21710Operon

DOOR ID: 1227138		GPOL_c21710,
GPOL_c21720		 View Structure
10 2559406-2559560 (+)FMN2559611-2560274 (+)ribE

Riboflavin synthase alpha chain RibE 		GPOL_c22650Operon

DOOR ID: 1227159		GPOL_c22650 (ribE),
GPOL_c22660 (ribBA),
GPOL_c22670 (ribH),
GPOL_c22680,
GPOL_c22690,
GPOL_c22700 (uvrC),
GPOL_c22710,
GPOL_c22720		 View Structure
11 2757312-2757378 (+)cobalamin2757436-2761093 (+)cobN

Aerobic cobaltochelatase subunit CobN 		GPOL_c24160Single gene

DOOR ID: 3427980		GPOL_c24160 (cobN) View Structure
12 2805774-2805838 (-)ykkC-III2805441-2805756 (-)GPOL_c24590

GPOL_c24590operon

DOOR ID: 1227200		GPOL_c24570,
GPOL_c24580,
GPOL_c24590		 View Structure
13 3188768-3188937 (-)ydaO-yuaA3188163-3188751 (-)GPOL_c28080

GPOL_c28080Single gene

DOOR ID: 3428125		GPOL_c28080 View Structure
14 3258213-3258295 (+)ZMP-ZTP3258305-3259178 (+)folD2

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]		GPOL_c28720Single gene

DOOR ID: 3428147		GPOL_c28720 (folD2) View Structure
15 3751684-3751759 (-)fluoride3751159-3751663 (-)crcB2

Putative fluoride ion transporter CrcB		GPOL_c33360Operon

DOOR ID: 1227390		GPOL_c33350 (crcB1),
GPOL_c33360 (crcB2),
GPOL_c33370,
GPOL_c33380		 View Structure
16 4405681-4405765 (-)SAM4404509-4405673 (-)GPOL_c38630

Putative luciferase-like monooxygenase		GPOL_c38630Operon

DOOR ID: 1227497		GPOL_c38570,
GPOL_c38580,
GPOL_c38590,
GPOL_c38600,
GPOL_c38610,
GPOL_c38620,
GPOL_c38630		 View Structure
17 4408361-4408439 (-)ZMP-ZTP4406953-4408342 (-)GPOL_c38650

NADH dehydrogenase		GPOL_c38650Single gene

DOOR ID: 3428464		GPOL_c38650 View Structure
18 4535297-4535470 (+)ydaO-yuaA4535477-4536089 (+)GPOL_c39790

Transglycosylase-like domain-containing protein		GPOL_c39790Single gene

DOOR ID: 3428513		GPOL_c39790 View Structure
19 4935370-4935483 (-)SAM-IV4934047-4935352 (-)GPOL_c43460

Putative aminotransferase; class V		GPOL_c43460Operon

DOOR ID: 1227597		GPOL_c43450,
GPOL_c43460		 View Structure
20 5604131-5604303 (-)ykoK5602128-5603943 (-)GPOL_c49700

ABC transporter; transmembrane domain protein		GPOL_c49700Operon

DOOR ID: 1227726		GPOL_c49690,
GPOL_c49700		 View Structure