Genome: Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 (NC_016863.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 126704-126803 (-)TPP125688-126672 (-)tbpA


DOOR ID: 973982
STMUK_0107 (thiQ),
STMUK_0108 (sfuB),
STMUK_0109 (tbpA)
View Structure
2 870847-870991 (+)MOCO871989-872502 (+)moaB


DOOR ID: 974122
STMUK_0807 (moaA),
STMUK_0808 (moaB),
STMUK_0809 (moaC),
STMUK_0810 (moaD),
STMUK_0811 (moaE),
STMUK_0812 (ybhL)
View Structure
3 1891527-1891628 (+)yybP-ykoY1891685-1892306 (+)yebN

STMUK_1807Single gene

DOOR ID: 3416375
STMUK_1807 (yebN) View Structure
4 2113642-2113817 (-)cobalamin2112165-2113545 (-)cbiA


DOOR ID: 974344
STMUK_2045 (erfK),
STMUK_2046 (cobT),
STMUK_2047 (cobS),
STMUK_2048 (cobU),
STMUK_2049 (cbiP),
STMUK_2050 (cbiO),
STMUK_2051 (cbiQ),
STMUK_2052 (cbiN),
STMUK_2053 (cbiM),
STMUK_2054 (cbiL),
STMUK_2055 (cbiK),
STMUK_2056 (cobK),
STMUK_2057 (cbiH),
STMUK_2058 (cbiG),
STMUK_2059 (cbiF),
STMUK_2060 (cbiT),
STMUK_2061 (cbiE),
STMUK_2062 (cbiD),
STMUK_2063 (cbiC),
STMUK_2064 (cobD),
STMUK_2065 (cbiA)
View Structure
5 2241622-2241718 (-)TPP2240792-2241590 (-)thiM


DOOR ID: 974360
STMUK_2174 (yegW),
STMUK_2175 (thiD),
STMUK_2176 (thiM)
View Structure
6 3324470-3324668 (-)FMN3323710-3324364 (-)ribB

STMUK_3184Single gene

DOOR ID: 3416860
STMUK_3184 (ribB) View Structure
7 4309042-4309235 (+)cobalamin4309300-4311145 (+)btuB


DOOR ID: 974747
STMUK_4114 (btuB),
STMUK_4115 (murI)
View Structure
8 4343659-4343822 (-)TPP4341677-4343573 (-)thiC


DOOR ID: 974754
STMUK_4143 (thiH),
STMUK_4144 (thiG),
STMUK_4146 (thiF),
STMUK_4147 (thiE),
STMUK_4148 (thiC)
View Structure
9 4541871-4541915 (+)mini-ykkC4541936-4542254 (+)sugE

STMUK_4323Single gene

DOOR ID: 3417265
STMUK_4323 (sugE) View Structure
10 4659917-4660029 (+)Mg sensor4660125-4662834 (+)mgtA

STMUK_4442Single gene

DOOR ID: 3417313
STMUK_4442 (mgtA) View Structure