Genome: Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 (NC_016857.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 126705-126804 (-)TPP125689-126673 (-)tbpA

Thiamine transporter substrate binding subunit

DOOR ID: 1221415
STM474_0113 (sgrR),
STM474_0111 (tbpA),
STM474_0110 (thiP),
STM474_0109 (thiQ)
View Structure
2 869761-869905 (+)MOCO870903-871416 (+)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 1221558
STM474_0832 (ybhL),
STM474_0831 (moaE),
STM474_0830 (moaD),
STM474_0829 (moaC),
STM474_0828 (moaB),
STM474_0827 (moaA)
View Structure
3 1889499-1889600 (+)yybP-ykoY1889657-1890278 (+)yebn

Probable manganese efflux pump MntP
STM474_1856Single gene

DOOR ID: 3412495
STM474_1856 (yebn) View Structure
4 2111613-2111788 (-)cobalamin2110136-2111516 (-)cbiA

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)

DOOR ID: 1221781
STM474_2120 (cbiA),
STM474_2119 (cbiB),
STM474_2118 (cbiC),
STM474_2117 (cbiD),
STM474_2116 (cbiE),
STM474_2115 (cbiT),
STM474_2114 (cbiF),
STM474_2113 (cbiG),
STM474_2112 (cbiH),
STM474_2111 (cbiJ),
STM474_2110 (cbiK),
STM474_2109 (cobI),
STM474_2108 (cbiM),
STM474_2107 (cbiN),
STM474_2106 (cbiQ),
STM474_2105 (cbiO),
STM474_2104 (cobQ),
STM474_2103 (cobU),
STM474_2102 (cobS),
STM474_2101 (cobT)
View Structure
5 2239593-2239689 (-)TPP2238763-2239561 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 1221796
STM474_2234 (thiM),
STM474_2233 (thiD),
View Structure
6 3379315-3379513 (-)FMN3378555-3379209 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
STM474_3349Single gene

DOOR ID: 3413021
STM474_3349 (ribB) View Structure
7 4369290-4369483 (+)cobalamin4369548-4371393 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 1222206
STM474_4313 (btuB),
STM474_4314 (murI)
View Structure
8 4403804-4403967 (-)TPP4401822-4403718 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 1222213
STM474_4345 (thiH),
STM474_4346 (thiG),
STM474_4347 (thiS),
STM474_4348 (thiF),
STM474_4349 (thiE),
STM474_4350 (thiC)
View Structure
9 4602016-4602060 (+)mini-ykkC4602081-4602399 (+)sugE

STM474_4535Single gene

DOOR ID: 3413432
STM474_4535 (sugE) View Structure
10 4720063-4720175 (+)Mg sensor4720199-4722980 (+)mgtA

Magnesium-translocating P-type ATPase
STM474_4654Single gene

DOOR ID: 3413480
STM474_4654 (mgtA) View Structure