Genome: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S (NC_016856.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 127414-127513 (-)TPP126398-127382 (-)tbpA

Thiamine transporter substrate binding subunit

DOOR ID: 1220348
STM14_0129 (yabN),
STM14_0127 (tbpA),
STM14_0126 (thiP),
STM14_0125 (thiQ)
View Structure
2 870847-870991 (+)MOCO871989-872502 (+)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 1220502
STM14_930 (moaA),
STM14_931 (moaB),
STM14_932 (moaC),
STM14_933 (moaD),
STM14_934 (moaE),
STM14_935 (ybhL)
View Structure
3 1943336-1943437 (+)yybP-ykoY1943494-1944115 (+)yebN

Probable manganese efflux pump MntP
STM14_2216Single gene

DOOR ID: 3410472
STM14_2216 (yebN) View Structure
4 2165449-2165624 (-)cobalamin2163972-2165352 (-)cbiA

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)

DOOR ID: 1220796
STM14_2504 (cobT),
STM14_2505 (cobS),
STM14_2506 (cobU),
STM14_2507 (cbiP),
STM14_2508 (cbiO),
STM14_2509 (cbiQ),
STM14_2510 (cbiN),
STM14_2511 (cbiM),
STM14_2512 (cbiL),
STM14_2513 (cbiK),
STM14_2514 (cbiJ),
STM14_2515 (cbiH),
STM14_2516 (cbiG),
STM14_2517 (cbiF),
STM14_2518 (cbiT),
STM14_2519 (cbiE),
STM14_2520 (cbiD),
STM14_2521 (cbiC),
STM14_2522 (cbiB),
STM14_2523 (cbiA)
View Structure
5 2293430-2293526 (-)TPP2292600-2293398 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 1220814
STM14_2646 (yegW),
STM14_2647 (thiD),
STM14_2648 (thiM)
View Structure
6 3376863-3377061 (-)FMN3376103-3376757 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
STM14_3869Single gene

DOOR ID: 3411047
STM14_3869 (ribB) View Structure
7 4361436-4361629 (+)cobalamin4361694-4363539 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 1221284
STM14_4965 (btuB),
STM14_4966 (murI)
View Structure
8 4396053-4396216 (-)TPP4394071-4395967 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 1221292
STM14_5000 (thiH),
STM14_5001 (thiG),
STM14_5003 (thiF),
STM14_5004 (thiE),
STM14_5005 (thiC)
View Structure
9 4594265-4594309 (+)mini-ykkC4594330-4594648 (+)sugE

STM14_5218Single gene

DOOR ID: 3411506
STM14_5218 (sugE) View Structure
10 4712312-4712424 (+)Mg sensor4712520-4715229 (+)mgtA

Magnesium-transporting ATPase; P-type 1 (Mg(2+) transport ATPase; P-type 1)
STM14_5349Single gene

DOOR ID: 3411552
STM14_5349 (mgtA) View Structure