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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
128117-128216
(-)
TPP
127101-128085 (-)
STBHUCCB_1250
STBHUCCB_1250
Operon
DOOR ID:
1218387
STBHUCCB_1270,
STBHUCCB_1260,
STBHUCCB_1250,
STBHUCCB_1240,
STBHUCCB_1230
View Structure
2
796334-796430
(+)
TPP
796461-797259 (+)
STBHUCCB_7570
STBHUCCB_7570
Operon
DOOR ID:
1218513
STBHUCCB_7570,
STBHUCCB_7580,
STBHUCCB_7590
View Structure
3
933235-933410
(+)
cobalamin
933460-934885 (+)
STBHUCCB_8940
STBHUCCB_8940
Operon
DOOR ID:
1218532
STBHUCCB_8940,
STBHUCCB_8950,
STBHUCCB_8960,
STBHUCCB_8970,
STBHUCCB_8980,
STBHUCCB_8990,
STBHUCCB_9000,
STBHUCCB_9010,
STBHUCCB_9020,
STBHUCCB_9030
View Structure
4
1126467-1126568
(-)
yybP-ykoY
1125788-1126409 (-)
STBHUCCB_11190
STBHUCCB_11190
Single gene
DOOR ID:
3404302
STBHUCCB_11190
View Structure
5
2142645-2142789
(-)
MOCO
2141133-2141646 (-)
STBHUCCB_22100
STBHUCCB_22100
Operon
DOOR ID:
1218756
STBHUCCB_22050,
STBHUCCB_22060,
STBHUCCB_22070,
STBHUCCB_22080,
STBHUCCB_22090,
STBHUCCB_22100,
STBHUCCB_22110
View Structure
6
3190248-3190446
(-)
FMN
3189488-3190142 (-)
STBHUCCB_32930
STBHUCCB_32930
Single gene
DOOR ID:
3405231
STBHUCCB_32930
View Structure
7
3544356-3544519
(+)
TPP
3544604-3546500 (+)
STBHUCCB_36460
STBHUCCB_36460
Operon
DOOR ID:
1219030
STBHUCCB_36460,
STBHUCCB_36470,
STBHUCCB_36480,
STBHUCCB_36490,
STBHUCCB_36500,
STBHUCCB_36510
View Structure
8
3577614-3577807
(-)
cobalamin
3575703-3577548 (-)
STBHUCCB_36720
STBHUCCB_36720
Operon
DOOR ID:
1219036
STBHUCCB_36710,
STBHUCCB_36720
View Structure
9
4528911-4528955
(+)
mini-ykkC
4528976-4529294 (+)
sugE
STBHUCCB_46440
Operon
DOOR ID:
1219226
STBHUCCB_46430,
STBHUCCB_46440
View Structure
10
4626526-4626638
(+)
Mg sensor
4626662-4629443 (+)
STBHUCCB_47450
STBHUCCB_47450
Single gene
DOOR ID:
3405747
STBHUCCB_47450
View Structure
Genome:
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12
(
NC_016832.1
);
Phylum:
Gammaproteobacteria
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P-stx-12";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"128117-128216";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"127101-128085";i:10;s:1:"-";i:11;s:13:"STBHUCCB_1250";i:12;s:0:"";i:13;s:13:"STBHUCCB_1250";i:14;s:6:"Operon";i:15;s:7:"1218387";i:16;s:69:"STBHUCCB_1270;STBHUCCB_1260;STBHUCCB_1250;STBHUCCB_1240;STBHUCCB_1230";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_016832.1";i:2;s:63:"Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"796334-796430";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"796461-797259";i:10;s:1:"+";i:11;s:13:"STBHUCCB_7570";i:12;s:0:"";i:13;s:13:"STBHUCCB_7570";i:14;s:6:"Operon";i:15;s:7:"1218513";i:16;s:41:"STBHUCCB_7570;STBHUCCB_7580;STBHUCCB_7590";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_016832.1";i:2;s:63:"Salmonella enterica subsp. enterica serovar Typhi str. 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P-stx-12";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1126467-1126568";i:6;s:1:"-";i:7;s:9:"yybP-ykoY";i:8;s:0:"";i:9;s:15:"1125788-1126409";i:10;s:1:"-";i:11;s:14:"STBHUCCB_11190";i:12;s:0:"";i:13;s:14:"STBHUCCB_11190";i:14;s:11:"Single gene";i:15;s:7:"3404302";i:16;s:14:"STBHUCCB_11190";i:17;s:0:"";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_016832.1";i:2;s:63:"Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"2142645-2142789";i:6;s:1:"-";i:7;s:4:"MOCO";i:8;s:0:"";i:9;s:15:"2141133-2141646";i:10;s:1:"-";i:11;s:14:"STBHUCCB_22100";i:12;s:0:"";i:13;s:14:"STBHUCCB_22100";i:14;s:6:"Operon";i:15;s:7:"1218756";i:16;s:104:"STBHUCCB_22050;STBHUCCB_22060;STBHUCCB_22070;STBHUCCB_22080;STBHUCCB_22090;STBHUCCB_22100;STBHUCCB_22110";i:17;s:0:"";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_016832.1";i:2;s:63:"Salmonella enterica subsp. enterica serovar Typhi str. 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