Genome: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (NC_016810.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 126705-126804 (-)TPP125689-126673 (-)tbpA

Thiamine-binding periplasmic protein		SL1344_0108Operon

DOOR ID: 967334		SL1344_0106 (yabJ),
SL1344_0107 (yabK),
SL1344_0108 (tbpA)		 View Structure
2 869761-869905 (+)MOCO870903-871416 (+)moaB

Molybdenum cofactor biosynthesis protein B		SL1344_0779Operon

DOOR ID: 967471		SL1344_0778 (moaA),
SL1344_0779 (moaB),
SL1344_0780 (moaC),
SL1344_0781 (moaD),
SL1344_0782 (moaE),
SL1344_0783		 View Structure
3 1889499-1889600 (+)yybP-ykoY1889711-1890278 (+)SL1344_1763

Probable manganese efflux pump MntP		SL1344_1763Single gene

DOOR ID: 3390219		SL1344_1763 View Structure
4 2111613-2111788 (-)cobalamin2110136-2111516 (-)cbiA

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)		SL1344_2011Operon

DOOR ID: 967690		SL1344_1991 (erfK),
SL1344_1992 (cobT),
SL1344_1993 (cobS),
SL1344_1994 (cobU),
SL1344_1995 (cbiP),
SL1344_1996 (cbiO),
SL1344_1997 (cbiQ),
SL1344_1998 (cbiN),
SL1344_1999 (cbiM),
SL1344_2000 (cbiL),
SL1344_2001 (cbiK),
SL1344_2002 (cbiJ),
SL1344_2003 (cbiH),
SL1344_2004 (cbiG),
SL1344_2005 (cbiF),
SL1344_2006 (cbiT),
SL1344_2007 (cbiE),
SL1344_2008 (cbiD),
SL1344_2009 (cbiC),
SL1344_2010 (cbiB),
SL1344_2011 (cbiA)		 View Structure
5 2239593-2239689 (-)TPP2238763-2239561 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		SL1344_2124Operon

DOOR ID: 967706		SL1344_2122,
SL1344_2123 (thiD),
SL1344_2124 (thiM)		 View Structure
6 3379315-3379513 (-)FMN3378555-3379209 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		SL1344_3168Single gene

DOOR ID: 3390703		SL1344_3168 (ribB) View Structure
7 4369289-4369482 (+)cobalamin4369505-4371392 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		SL1344_4079Operon

DOOR ID: 968101		SL1344_4079 (btuB),
SL1344_4080 (murI)		 View Structure
8 4403803-4403966 (-)TPP4401821-4403717 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		SL1344_4103Operon

DOOR ID: 968107		SL1344_4098 (thiH),
SL1344_4099 (thiG),
SL1344_4100 (thiS),
SL1344_4101 (thiF),
SL1344_4102 (thiE),
SL1344_4103 (thiC)		 View Structure
9 4602015-4602059 (+)mini-ykkC4602080-4602398 (+)sugE

SL1344_4275Single gene

DOOR ID: 3391115		SL1344_4275 (sugE) View Structure
10 4720062-4720174 (+)Mg sensor4720270-4722979 (+)mgtA

Mg(2+) transport ATPase; P-type		SL1344_4387Single gene

DOOR ID: 3391162		SL1344_4387 (mgtA) View Structure