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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
447878-447970
(+)
TPP
448090-449011 (+)
thiB
Pmu_04400
Operon
DOOR ID:
1331818
Pmu_04430
(bioB)
,
Pmu_04420
(thiQ)
,
Pmu_04410
(thiP)
,
Pmu_04400
(thiB)
View Structure
2
610742-610878
(-)
MOCO
608234-610721 (-)
torZ
Pmu_05990
Single gene
DOOR ID:
3388528
Pmu_05990
(torZ)
View Structure
3
725827-725976
(-)
MOCO
724288-724765 (-)
moaC
Pmu_06910
Operon
DOOR ID:
1331868
Pmu_06920
(moaA)
,
Pmu_06910
(moaC)
,
Pmu_06900
(moaD)
,
Pmu_06890
(moaE)
View Structure
4
1024798-1024972
(-)
lysine
1023183-1024707 (-)
Pmu_09570
Pmu_09570
Single gene
DOOR ID:
3388665
Pmu_09570
View Structure
5
1211500-1211565
(+)
PreQ1
1211568-1212255 (+)
queC
Pmu_11270
Operon
DOOR ID:
1331959
Pmu_11290,
Pmu_11280
(queD)
,
Pmu_11270
(queC)
View Structure
6
1310056-1310177
(-)
glycine
1308566-1309940 (-)
Pmu_12280
Pmu_12280
Single gene
DOOR ID:
3388744
Pmu_12280
View Structure
7
1766347-1766502
(-)
FMN
1765585-1766230 (-)
ribB
Pmu_16360
Single gene
DOOR ID:
3388861
Pmu_16360
(ribB)
View Structure
8
2050461-2050564
(-)
TPP
2049651-2050380 (-)
Pmu_19270
Pmu_19270
Operon
DOOR ID:
1332114
Pmu_19240,
Pmu_19250,
Pmu_19260,
Pmu_19270
View Structure
Genome:
Pasteurella multocida 36950
(
NC_016808.1
);
Phylum:
Gammaproteobacteria
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