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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
79233-79323
(-)
glycine
77647-78925 (-)
glyA2
BCGMEX_0072c
Operon
DOOR ID:
1213873
BCGMEX_0072c
(glyA2)
,
BCGMEX_0071c
(sdaA)
View Structure
2
308050-308223
(-)
cobalamin
306241-307912 (-)
PPE2
BCGMEX_0263c
Operon
DOOR ID:
1213913
BCGMEX_0263c
(PPE2)
,
BCGMEX_0262c
(cobQ1)
,
BCGMEX_0261c
(cobU)
View Structure
3
502196-502306
(+)
TPP
503315-503522 (+)
thiS
BCGMEX_0426
Operon
DOOR ID:
1213946
BCGMEX_0427
(thiG)
,
BCGMEX_0426
(thiS)
,
BCGMEX_0425
(thiO)
View Structure
4
511365-511475
(-)
TPP
508906-509704 (-)
thiD
BCGMEX_0432c
Operon
DOOR ID:
1213947
BCGMEX_0433c
(thiC)
,
BCGMEX_0432c
(thiD)
,
BCGMEX_0431c
View Structure
5
966275-966497
(-)
ydaO-yuaA
965041-966265 (-)
rpfA
BCGMEX_0890c
Single gene
DOOR ID:
3386605
BCGMEX_0890c
(rpfA)
View Structure
6
1263173-1263391
(-)
cobalamin
1260760-1263040 (-)
metE
BCGMEX_1166c
Single gene
DOOR ID:
3386715
BCGMEX_1166c
(metE)
View Structure
7
1718129-1718298
(+)
ykoK
1718595-1718832 (+)
BCGMEX_1559
BCGMEX_1559
Single gene
DOOR ID:
3386862
BCGMEX_1559
View Structure
8
2027962-2028136
(+)
ykoK
2028438-2028738 (+)
PE20
BCGMEX_1820
Operon
DOOR ID:
1214259
BCGMEX_1820
(PE20)
,
BCGMEX_1821
(PPE31)
View Structure
9
2055933-2056030
(+)
glycine
2056196-2059022 (+)
gcvB
BCGMEX_1848
Operon
DOOR ID:
1214264
BCGMEX_1846,
BCGMEX_1847,
BCGMEX_1848
(gcvB)
View Structure
10
3696620-3696739
(+)
SAM-IV
3696775-3698125 (+)
metC
BCGMEX_3408
Operon
DOOR ID:
1214627
BCGMEX_3408
(metC)
,
BCGMEX_3409
(metX)
,
BCGMEX_3410
View Structure
Genome:
Mycobacterium bovis BCG str. Mexico
(
NC_016804.1
);
Phylum:
Actinobacteria
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