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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
227891-227997
(-)
TPP
226928-227804 (-)
thiD
BSVBI22_A0218
Operon
DOOR ID:
963715
BSVBI22_A0211,
BSVBI22_A0212,
BSVBI22_A0213,
BSVBI22_A0214
(thiE)
,
BSVBI22_A0215
(thiG)
,
BSVBI22_A0216,
BSVBI22_A0217,
BSVBI22_A0218
(thiD)
View Structure
2
318028-318107
(-)
sam-alpha
316740-317937 (-)
metZ
BSVBI22_A0306
Single gene
DOOR ID:
3380633
BSVBI22_A0306
(metZ)
View Structure
3
1270631-1270868
(-)
cobalamin
1270391-1270580 (-)
BSVBI22_A1306
BSVBI22_A1306
Operon
DOOR ID:
963942
BSVBI22_A1300,
BSVBI22_A1301
(cobO)
,
BSVBI22_A1302
(cobN)
,
BSVBI22_A1303,
BSVBI22_A1304
(cobU)
,
BSVBI22_A1305,
BSVBI22_A1306
View Structure
4
1309019-1309247
(-)
cobalamin
1306999-1308862 (-)
BSVBI22_A1342
BSVBI22_A1342
Operon
DOOR ID:
963948
BSVBI22_A1339,
BSVBI22_A1340,
BSVBI22_A1341,
BSVBI22_A1342
View Structure
5
1683029-1683075
(+)
glutamine
1683238-1684675 (-)
pyk
BSVBI22_A1744
Operon
DOOR ID:
964038
BSVBI22_A1744
(pyk)
,
BSVBI22_A1745
View Structure
6
1689851-1690021
(+)
TPP
1690062-1691067 (+)
tbpA
BSVBI22_A1753
Operon
DOOR ID:
964041
BSVBI22_A1753
(tbpA)
,
BSVBI22_A1754
(thiP)
,
BSVBI22_A1755
View Structure
Genome:
Brucella suis VBI22 chromosome I
(
NC_016797.1
);
Phylum:
Alphaproteobacteria
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