About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
628762-628994
(+)
cobalamin
629006-629237 (+)
BAA13334_II00984
BAA13334_II00984
Operon
DOOR ID:
957830
BAA13334_II00984,
BAA13334_II00985,
BAA13334_II00987,
BAA13334_II00989
View Structure
2
653986-654070
(+)
glycine
654217-655321 (+)
BAA13334_II01033
BAA13334_II01033
Operon
DOOR ID:
957836
BAA13334_II01033,
BAA13334_II01034,
BAA13334_II01037
View Structure
3
693174-693337
(-)
FMN
692620-693097 (-)
BAA13334_II01095
BAA13334_II01095
Single gene
DOOR ID:
3365752
BAA13334_II01095
View Structure
4
1024197-1024410
(-)
cobalamin
1023872-1024034 (+)
BAA13334_II01601
BAA13334_II01601
Single gene
DOOR ID:
3365830
BAA13334_II01601
View Structure
Genome:
Brucella abortus A13334 chromosome II
(
NC_016777.1
);
Phylum:
Alphaproteobacteria
a:5:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_016777.1";i:2;s:37:"Brucella abortus A13334 chromosome II";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"628762-628994";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"629006-629237";i:10;s:1:"+";i:11;s:16:"BAA13334_II00984";i:12;s:0:"";i:13;s:16:"BAA13334_II00984";i:14;s:6:"Operon";i:15;s:6:"957830";i:16;s:67:"BAA13334_II00984;BAA13334_II00985;BAA13334_II00987;BAA13334_II00989";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_016777.1";i:2;s:37:"Brucella abortus A13334 chromosome II";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"653986-654070";i:6;s:1:"+";i:7;s:7:"glycine";i:8;s:0:"";i:9;s:13:"654217-655321";i:10;s:1:"+";i:11;s:16:"BAA13334_II01033";i:12;s:0:"";i:13;s:16:"BAA13334_II01033";i:14;s:6:"Operon";i:15;s:6:"957836";i:16;s:50:"BAA13334_II01033;BAA13334_II01034;BAA13334_II01037";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_016777.1";i:2;s:37:"Brucella abortus A13334 chromosome II";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"693174-693337";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:13:"692620-693097";i:10;s:1:"-";i:11;s:16:"BAA13334_II01095";i:12;s:0:"";i:13;s:16:"BAA13334_II01095";i:14;s:11:"Single gene";i:15;s:7:"3365752";i:16;s:16:"BAA13334_II01095";i:17;s:0:"";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_016777.1";i:2;s:37:"Brucella abortus A13334 chromosome II";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:15:"1024197-1024410";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"1023872-1024034";i:10;s:1:"+";i:11;s:16:"BAA13334_II01601";i:12;s:0:"";i:13;s:16:"BAA13334_II01601";i:14;s:11:"Single gene";i:15;s:7:"3365830";i:16;s:16:"BAA13334_II01601";i:17;s:0:"";i:18;s:15:"View Structure ";}}