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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
440833-440912
(+)
sam-alpha
440988-442197 (+)
metZ
O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
AZOBR_10473
Single gene
DOOR ID:
3341269
AZOBR_10473
(metZ)
View Structure
2
860401-860471
(-)
glycine
858891-859758 (+)
AZOBR_40320
Class I diheme cytochrome c
AZOBR_40320
Single gene
DOOR ID:
3341469
AZOBR_40320
View Structure
3
947822-947974
(+)
FMN
948125-948812 (+)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
AZOBR_40419
Operon
DOOR ID:
1324148
AZOBR_40419
(ribB)
,
AZOBR_40418
View Structure
4
1414851-1414948
(+)
TPP
1415017-1416172 (+)
AZOBR_100136
Putative ABC transporter; periplasmic ligand-binding component
AZOBR_100136
Operon
DOOR ID:
1324241
AZOBR_100136,
AZOBR_100137,
AZOBR_100138,
AZOBR_100139,
AZOBR_100140,
AZOBR_100141
View Structure
5
1672248-1672360
(+)
TPP
1672476-1674318 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
AZOBR_110003
Single gene
DOOR ID:
3341802
AZOBR_110003
(thiC)
View Structure
6
1913366-1913431
(-)
mini-ykkC
1913023-1913341 (-)
sugE
AZOBR_140035
Operon
DOOR ID:
1324344
AZOBR_140035
(sugE)
,
AZOBR_140036,
AZOBR_140037,
AZOBR_140038,
AZOBR_140039
View Structure
7
2199232-2199345
(-)
glycine
2197943-2199056 (-)
gcvT
Glycine cleavage system T-protein (Aminomethyltransferase) (0)
AZOBR_150031
Operon
DOOR ID:
1324402
AZOBR_150030
(gcvH)
,
AZOBR_150031
(gcvT)
,
AZOBR_150032,
AZOBR_150033
View Structure
Genome:
Azospirillum brasilense Sp245
(
NC_016617.1
);
Phylum:
Alphaproteobacteria
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