Genome: Streptomyces bingchenggensis BCW-1 (NC_016582.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1256169-1256230 (+)ykkC-III1256241-1256556 (+)SBI_00861

SBI_00861operon

DOOR ID: 937943		SBI_00861,
SBI_00862,
SBI_00863		 View Structure
2 1728218-1728344 (+)cobalamin1728545-1728863 (+)SBI_01258

SBI_01258Single gene

DOOR ID: 3316989		SBI_01258 View Structure
3 1731427-1731502 (-)cobalamin1729882-1731301 (-)SBI_01260

SBI_01260Operon

DOOR ID: 938037		SBI_01259,
SBI_01260		 View Structure
4 1731591-1731733 (+)cobalamin1731898-1734619 (+)SBI_01261

SBI_01261Operon

DOOR ID: 938038		SBI_01261,
SBI_01262,
SBI_01263,
SBI_01264,
SBI_01265		 View Structure
5 1741802-1742021 (-)cobalamin1739317-1741636 (-)SBI_01266

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		SBI_01266Single gene

DOOR ID: 3316990		SBI_01266 View Structure
6 2364313-2364474 (-)cobalamin2360634-2364282 (-)cobN

Cobaltochelatase subunit CobN 		SBI_01764Operon

DOOR ID: 938142		SBI_01763,
SBI_01764 (cobN)		 View Structure
7 2899648-2899829 (+)ydaO-yuaA2899834-2901127 (+)SBI_02129

SBI_02129Single gene

DOOR ID: 3317208		SBI_02129 View Structure
8 3162415-3162545 (-)FMN3161131-3162268 (-)SBI_02330

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		SBI_02330Operon

DOOR ID: 938262		SBI_02324,
SBI_02325 (hisG),
SBI_02326 (hisE),
SBI_02327 (ribH),
SBI_02328 (ribA1),
SBI_02329,
SBI_02330		 View Structure
9 4177279-4177493 (-)cobalamin4176175-4177225 (-)SBI_03198

Putative ABC transporter solute-binding protein		SBI_03198Operon

DOOR ID: 938458		SBI_03196,
SBI_03197,
SBI_03198		 View Structure
10 4179251-4179402 (-)cobalamin4178992-4179214 (-)SBI_03201

SBI_03201Operon

DOOR ID: 938459		SBI_03200,
SBI_03201		 View Structure
11 4267327-4267523 (-)ydaO-yuaA4266489-4267314 (-)SBI_03283

Putative peptidase		SBI_03283Single gene

DOOR ID: 3317483		SBI_03283 View Structure
12 4488828-4488932 (-)TPP4486053-4487667 (-)SBI_03444

Thiamine transport system permease protein		SBI_03444Operon

DOOR ID: 938517		SBI_03443,
SBI_03444,
SBI_03445,
SBI_03446,
SBI_03447 (cdsA)		 View Structure
13 4674443-4674553 (+)glycine4674711-4675833 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		SBI_03614Operon

DOOR ID: 938561		SBI_03614 (gcvT),
SBI_03615 (gcvH),
SBI_03616 (glyA),
SBI_03617 (sdaA)		 View Structure
14 5095109-5095239 (+)cobalamin5095370-5097770 (+)SBI_04001

Ribonucleoside-diphosphate reductase 		SBI_04001Operon

DOOR ID: 938650		SBI_04001,
SBI_04002		 View Structure
15 5704650-5704820 (-)ydaO-yuaA5703943-5704648 (-)SBI_04563

Secreted protein		SBI_04563Single gene

DOOR ID: 3317852		SBI_04563 View Structure
16 5879792-5879885 (-)ZMP-ZTP5878437-5879748 (-)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		SBI_04724Single gene

DOOR ID: 3317903		SBI_04724 (glyA) View Structure
17 5937520-5937698 (+)ydaO-yuaA5937705-5938893 (+)SBI_04772

NLP/P60 family secreted protein		SBI_04772Single gene

DOOR ID: 3317917		SBI_04772 View Structure
18 6129982-6130126 (-)SAM6128650-6129964 (-)thrC3

Threonine synthase 		SBI_04949Operon

DOOR ID: 938879		SBI_04948,
SBI_04949 (thrC3)		 View Structure
19 6422187-6422311 (-)TPP6421987-6422155 (+)SBI_05215

SBI_05215Operon

DOOR ID: 938941		SBI_05214,
SBI_05215		 View Structure
20 6546756-6546899 (-)TPP6543967-6544927 (+)SBI_05326

Putative transcriptional regulator; MerR family protein		SBI_05326Operon

DOOR ID: 938963		SBI_05324,
SBI_05325,
SBI_05326		 View Structure
21 6995978-6996154 (+)ydaO-yuaA6996336-6997311 (+)SBI_05749

Peptidase		SBI_05749Single gene

DOOR ID: 3318235		SBI_05749 View Structure
22 8344737-8344824 (+)ZMP-ZTP8344846-8345710 (+)SBI_06972

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]		SBI_06972Single gene

DOOR ID: 3318591		SBI_06972 View Structure
23 8987917-8987996 (-)cobalamin8986390-8987731 (-)SBI_07569

Secreted protein		SBI_07569Operon

DOOR ID: 939454		SBI_07565,
SBI_07566,
SBI_07567,
SBI_07568,
SBI_07569		 View Structure
24 9270891-9271008 (+)SAM-IV9271219-9272599 (+)SBI_07820

Putative pyridoxalphosphate-dependent protein		SBI_07820Single gene

DOOR ID: 3318891		SBI_07820 View Structure
25 9307766-9307879 (-)TPP9306285-9306522 (-)thiS

SBI_07854Operon

DOOR ID: 939518		SBI_07852,
SBI_07853 (thiG),
SBI_07854 (thiS),
SBI_07855 (goxB)		 View Structure
26 9634931-9635067 (-)cobalamin9634759-9634876 (-)SBI_08146

SBI_08146Operon

DOOR ID: 939582		SBI_08138,
SBI_08139,
SBI_08140 (cobJ),
SBI_08141 (cobB),
SBI_08142 (cobA),
SBI_08143 (chlI),
SBI_08144 (cobQ),
SBI_08145 (cobD),
SBI_08146		 View Structure
27 10368438-10368535 (+)glycine10368724-10371619 (+)SBI_08743

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		SBI_08743Single gene

DOOR ID: 3319148		SBI_08743 View Structure
28 11274558-11274671 (+)SAM-IV11275021-11276641 (+)SBI_09483

Putative ABC transporter substrate-binding protein		SBI_09483Operon

DOOR ID: 939867		SBI_09483,
SBI_09484,
SBI_09485,
SBI_09486		 View Structure