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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
132831-132925
(+)
TPP
134707-134839 (+)
TIA2EST22_00545
TIA2EST22_00545
Operon
DOOR ID:
1319900
TIA2EST22_00550
(thiE)
,
TIA2EST22_00545
View Structure
2
187811-187914
(+)
TPP
187948-188578 (+)
TIA2EST22_00785
TIA2EST22_00785
Operon
DOOR ID:
1319912
TIA2EST22_00790,
TIA2EST22_00785
View Structure
3
381977-382162
(-)
cobalamin
380915-381950 (-)
TIA2EST22_01690
TIA2EST22_01690
Operon
DOOR ID:
1319942
TIA2EST22_01690,
TIA2EST22_01685,
TIA2EST22_01680
View Structure
4
454196-454333
(+)
cobalamin
454364-455120 (+)
TIA2EST22_02070
TIA2EST22_02070
Operon
DOOR ID:
1319959
TIA2EST22_02090,
TIA2EST22_02085,
TIA2EST22_02080,
TIA2EST22_02075,
TIA2EST22_02070
View Structure
5
461526-461704
(+)
cobalamin
461746-462811 (+)
TIA2EST22_02100
TIA2EST22_02100
Operon
DOOR ID:
1319960
TIA2EST22_02110,
TIA2EST22_02105,
TIA2EST22_02100,
TIA2EST22_02095
View Structure
6
471261-471375
(+)
cobalamin
471417-472032 (+)
TIA2EST22_02155
TIA2EST22_02155
Operon
DOOR ID:
1319962
TIA2EST22_02165,
TIA2EST22_02160,
TIA2EST22_02155
View Structure
7
476038-476145
(+)
cobalamin
476236-477907 (+)
TIA2EST22_02175
TIA2EST22_02175
Operon
DOOR ID:
1319963
TIA2EST22_02185,
TIA2EST22_02180,
TIA2EST22_02175
View Structure
8
565063-565174
(-)
TPP
563546-563816 (-)
TIA2EST22_02595
TIA2EST22_02595
Operon
DOOR ID:
1319979
TIA2EST22_02600,
TIA2EST22_02595,
TIA2EST22_02590
(thiG)
,
TIA2EST22_02585
View Structure
9
647538-647790
(+)
cobalamin
647869-649780 (+)
TIA2EST22_03000
TIA2EST22_03000
Operon
DOOR ID:
1319995
TIA2EST22_03005,
TIA2EST22_03000
View Structure
10
710849-711035
(+)
cobalamin
711075-712089 (+)
TIA2EST22_03310
TIA2EST22_03310
Operon
DOOR ID:
1320010
TIA2EST22_03325,
TIA2EST22_03320,
TIA2EST22_03315,
TIA2EST22_03310
View Structure
11
854554-854696
(+)
cobalamin
855116-856343 (+)
TIA2EST22_03975
TIA2EST22_03975
Single gene
DOOR ID:
3312587
TIA2EST22_03975
View Structure
12
936938-937051
(+)
TPP
937839-938490 (+)
TIA2EST22_04415
TIA2EST22_04415
Operon
DOOR ID:
1320055
TIA2EST22_04410,
TIA2EST22_04415
View Structure
13
1771931-1771999
(-)
cobalamin
1770859-1771735 (-)
TIA2EST22_08165
TIA2EST22_08165
Operon
DOOR ID:
1320213
TIA2EST22_08155,
TIA2EST22_08160,
TIA2EST22_08165
View Structure
14
1864969-1865103
(-)
FMN
1863899-1864895 (-)
TIA2EST22_08605
TIA2EST22_08605
Operon
DOOR ID:
1320232
TIA2EST22_08580
(purH)
,
TIA2EST22_08585
(purN)
,
TIA2EST22_08590
(ribH)
,
TIA2EST22_08595,
TIA2EST22_08600,
TIA2EST22_08605
View Structure
15
2232187-2232387
(+)
cobalamin
2232498-2235069 (+)
TIA2EST22_10330
TIA2EST22_10330
Operon
DOOR ID:
1320300
TIA2EST22_10330,
TIA2EST22_10335
(nrdF)
View Structure
16
2255191-2255432
(-)
cobalamin
2252772-2255115 (-)
TIA2EST22_10430
TIA2EST22_10430
Operon
DOOR ID:
1320304
TIA2EST22_10425,
TIA2EST22_10430
View Structure
Genome:
Propionibacterium acnes TypeIA2 P.acn17
(
NC_016512.1
);
Phylum:
Actinobacteria
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";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"187811-187914";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"187948-188578";i:10;s:1:"+";i:11;s:15:"TIA2EST22_00785";i:12;s:0:"";i:13;s:15:"TIA2EST22_00785";i:14;s:6:"Operon";i:15;s:7:"1319912";i:16;s:31:"TIA2EST22_00790;TIA2EST22_00785";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"381977-382162";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"380915-381950";i:10;s:1:"-";i:11;s:15:"TIA2EST22_01690";i:12;s:0:"";i:13;s:15:"TIA2EST22_01690";i:14;s:6:"Operon";i:15;s:7:"1319942";i:16;s:47:"TIA2EST22_01690;TIA2EST22_01685;TIA2EST22_01680";i:17;s:0:"";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"454196-454333";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"454364-455120";i:10;s:1:"+";i:11;s:15:"TIA2EST22_02070";i:12;s:0:"";i:13;s:15:"TIA2EST22_02070";i:14;s:6:"Operon";i:15;s:7:"1319959";i:16;s:79:"TIA2EST22_02090;TIA2EST22_02085;TIA2EST22_02080;TIA2EST22_02075;TIA2EST22_02070";i:17;s:0:"";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"461526-461704";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"461746-462811";i:10;s:1:"+";i:11;s:15:"TIA2EST22_02100";i:12;s:0:"";i:13;s:15:"TIA2EST22_02100";i:14;s:6:"Operon";i:15;s:7:"1319960";i:16;s:63:"TIA2EST22_02110;TIA2EST22_02105;TIA2EST22_02100;TIA2EST22_02095";i:17;s:0:"";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"471261-471375";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"471417-472032";i:10;s:1:"+";i:11;s:15:"TIA2EST22_02155";i:12;s:0:"";i:13;s:15:"TIA2EST22_02155";i:14;s:6:"Operon";i:15;s:7:"1319962";i:16;s:47:"TIA2EST22_02165;TIA2EST22_02160;TIA2EST22_02155";i:17;s:0:"";i:18;s:15:"View Structure ";}i:7;a:19:{i:0;i:7;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"476038-476145";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"476236-477907";i:10;s:1:"+";i:11;s:15:"TIA2EST22_02175";i:12;s:0:"";i:13;s:15:"TIA2EST22_02175";i:14;s:6:"Operon";i:15;s:7:"1319963";i:16;s:47:"TIA2EST22_02185;TIA2EST22_02180;TIA2EST22_02175";i:17;s:0:"";i:18;s:15:"View Structure ";}i:8;a:19:{i:0;i:8;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"565063-565174";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"563546-563816";i:10;s:1:"-";i:11;s:15:"TIA2EST22_02595";i:12;s:0:"";i:13;s:15:"TIA2EST22_02595";i:14;s:6:"Operon";i:15;s:7:"1319979";i:16;s:69:"TIA2EST22_02600;TIA2EST22_02595;TIA2EST22_02590(thiG);TIA2EST22_02585";i:17;s:0:"";i:18;s:15:"View Structure ";}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"647538-647790";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"647869-649780";i:10;s:1:"+";i:11;s:15:"TIA2EST22_03000";i:12;s:0:"";i:13;s:15:"TIA2EST22_03000";i:14;s:6:"Operon";i:15;s:7:"1319995";i:16;s:31:"TIA2EST22_03005;TIA2EST22_03000";i:17;s:0:"";i:18;s:15:"View Structure ";}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"710849-711035";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"711075-712089";i:10;s:1:"+";i:11;s:15:"TIA2EST22_03310";i:12;s:0:"";i:13;s:15:"TIA2EST22_03310";i:14;s:6:"Operon";i:15;s:7:"1320010";i:16;s:63:"TIA2EST22_03325;TIA2EST22_03320;TIA2EST22_03315;TIA2EST22_03310";i:17;s:0:"";i:18;s:15:"View Structure ";}i:11;a:19:{i:0;i:11;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"854554-854696";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"855116-856343";i:10;s:1:"+";i:11;s:15:"TIA2EST22_03975";i:12;s:0:"";i:13;s:15:"TIA2EST22_03975";i:14;s:11:"Single gene";i:15;s:7:"3312587";i:16;s:15:"TIA2EST22_03975";i:17;s:0:"";i:18;s:15:"View Structure ";}i:12;a:19:{i:0;i:12;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"936938-937051";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"937839-938490";i:10;s:1:"+";i:11;s:15:"TIA2EST22_04415";i:12;s:0:"";i:13;s:15:"TIA2EST22_04415";i:14;s:6:"Operon";i:15;s:7:"1320055";i:16;s:31:"TIA2EST22_04410;TIA2EST22_04415";i:17;s:0:"";i:18;s:15:"View Structure ";}i:13;a:19:{i:0;i:13;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1771931-1771999";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"1770859-1771735";i:10;s:1:"-";i:11;s:15:"TIA2EST22_08165";i:12;s:0:"";i:13;s:15:"TIA2EST22_08165";i:14;s:6:"Operon";i:15;s:7:"1320213";i:16;s:47:"TIA2EST22_08155;TIA2EST22_08160;TIA2EST22_08165";i:17;s:0:"";i:18;s:15:"View Structure ";}i:14;a:19:{i:0;i:14;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1864969-1865103";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1863899-1864895";i:10;s:1:"-";i:11;s:15:"TIA2EST22_08605";i:12;s:0:"";i:13;s:15:"TIA2EST22_08605";i:14;s:6:"Operon";i:15;s:7:"1320232";i:16;s:113:"TIA2EST22_08580(purH);TIA2EST22_08585(purN);TIA2EST22_08590(ribH);TIA2EST22_08595;TIA2EST22_08600;TIA2EST22_08605";i:17;s:0:"";i:18;s:15:"View Structure ";}i:15;a:19:{i:0;i:15;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2232187-2232387";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2232498-2235069";i:10;s:1:"+";i:11;s:15:"TIA2EST22_10330";i:12;s:0:"";i:13;s:15:"TIA2EST22_10330";i:14;s:6:"Operon";i:15;s:7:"1320300";i:16;s:37:"TIA2EST22_10330;TIA2EST22_10335(nrdF)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:16;a:19:{i:0;i:16;i:1;s:11:"NC_016512.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn17 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2255191-2255432";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2252772-2255115";i:10;s:1:"-";i:11;s:15:"TIA2EST22_10430";i:12;s:0:"";i:13;s:15:"TIA2EST22_10430";i:14;s:6:"Operon";i:15;s:7:"1320304";i:16;s:31:"TIA2EST22_10425;TIA2EST22_10430";i:17;s:0:"";i:18;s:15:"View Structure ";}}