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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
132840-132934
(+)
TPP
134671-134848 (+)
TIA2EST36_00565
TIA2EST36_00565
Operon
DOOR ID:
936858
TIA2EST36_00565,
TIA2EST36_00570
(thiE)
View Structure
2
187831-187934
(+)
TPP
187968-188598 (+)
TIA2EST36_00800
TIA2EST36_00800
Operon
DOOR ID:
936869
TIA2EST36_00800,
TIA2EST36_00805
View Structure
3
382615-382800
(-)
cobalamin
381553-382588 (-)
TIA2EST36_01675
TIA2EST36_01675
Operon
DOOR ID:
936900
TIA2EST36_01665,
TIA2EST36_01670,
TIA2EST36_01675
View Structure
4
454834-454971
(+)
cobalamin
455002-455758 (+)
TIA2EST36_02045
TIA2EST36_02045
Operon
DOOR ID:
936919
TIA2EST36_02045,
TIA2EST36_02050,
TIA2EST36_02055,
TIA2EST36_02060,
TIA2EST36_02065
View Structure
5
462163-462341
(+)
cobalamin
462383-463448 (+)
TIA2EST36_02075
TIA2EST36_02075
Operon
DOOR ID:
936920
TIA2EST36_02070,
TIA2EST36_02075,
TIA2EST36_02080,
TIA2EST36_02085
View Structure
6
471898-472012
(+)
cobalamin
472054-472669 (+)
TIA2EST36_02130
TIA2EST36_02130
Operon
DOOR ID:
936923
TIA2EST36_02130,
TIA2EST36_02135,
TIA2EST36_02140
View Structure
7
476675-476782
(+)
cobalamin
476873-478544 (+)
TIA2EST36_02150
TIA2EST36_02150
Operon
DOOR ID:
936924
TIA2EST36_02150,
TIA2EST36_02155,
TIA2EST36_02160
View Structure
8
565698-565809
(-)
TPP
564181-564451 (-)
TIA2EST36_02570
TIA2EST36_02570
Operon
DOOR ID:
936945
TIA2EST36_02560,
TIA2EST36_02565
(thiG)
,
TIA2EST36_02570,
TIA2EST36_02575
View Structure
9
648176-648428
(+)
cobalamin
648507-650418 (+)
TIA2EST36_02975
TIA2EST36_02975
Operon
DOOR ID:
936967
TIA2EST36_02975,
TIA2EST36_02980,
TIA2EST36_02985
View Structure
10
711461-711647
(+)
cobalamin
711687-712701 (+)
TIA2EST36_03280
TIA2EST36_03280
Operon
DOOR ID:
936981
TIA2EST36_03280,
TIA2EST36_03285,
TIA2EST36_03290,
TIA2EST36_03295
View Structure
11
855178-855320
(+)
cobalamin
855695-856967 (+)
TIA2EST36_03945
TIA2EST36_03945
Single gene
DOOR ID:
3311912
TIA2EST36_03945
View Structure
12
937562-937675
(+)
TPP
938463-939114 (+)
TIA2EST36_04385
TIA2EST36_04385
Operon
DOOR ID:
937030
TIA2EST36_04380,
TIA2EST36_04385,
TIA2EST36_04390,
TIA2EST36_04395
View Structure
13
1772473-1772544
(-)
cobalamin
1769711-1770101 (-)
TIA2EST36_08140
TIA2EST36_08140
Single gene
DOOR ID:
3312080
TIA2EST36_08140
View Structure
14
1865543-1865677
(-)
FMN
1864473-1865469 (-)
TIA2EST36_08590
TIA2EST36_08590
Operon
DOOR ID:
937205
TIA2EST36_08565
(purH)
,
TIA2EST36_08570
(purN)
,
TIA2EST36_08575
(ribH)
,
TIA2EST36_08580,
TIA2EST36_08585,
TIA2EST36_08590
View Structure
15
2232784-2232984
(+)
cobalamin
2233095-2235666 (+)
TIA2EST36_10310
TIA2EST36_10310
Operon
DOOR ID:
937280
TIA2EST36_10310,
TIA2EST36_10315
(nrdF)
View Structure
16
2255849-2256090
(-)
cobalamin
2253430-2255773 (-)
TIA2EST36_10410
TIA2EST36_10410
Operon
DOOR ID:
937285
TIA2EST36_10405,
TIA2EST36_10410
View Structure
Genome:
Propionibacterium acnes TypeIA2 P.acn31
(
NC_016511.1
);
Phylum:
Actinobacteria
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";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"187831-187934";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"187968-188598";i:10;s:1:"+";i:11;s:15:"TIA2EST36_00800";i:12;s:0:"";i:13;s:15:"TIA2EST36_00800";i:14;s:6:"Operon";i:15;s:6:"936869";i:16;s:31:"TIA2EST36_00800;TIA2EST36_00805";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"382615-382800";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"381553-382588";i:10;s:1:"-";i:11;s:15:"TIA2EST36_01675";i:12;s:0:"";i:13;s:15:"TIA2EST36_01675";i:14;s:6:"Operon";i:15;s:6:"936900";i:16;s:47:"TIA2EST36_01665;TIA2EST36_01670;TIA2EST36_01675";i:17;s:0:"";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"454834-454971";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"455002-455758";i:10;s:1:"+";i:11;s:15:"TIA2EST36_02045";i:12;s:0:"";i:13;s:15:"TIA2EST36_02045";i:14;s:6:"Operon";i:15;s:6:"936919";i:16;s:79:"TIA2EST36_02045;TIA2EST36_02050;TIA2EST36_02055;TIA2EST36_02060;TIA2EST36_02065";i:17;s:0:"";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"462163-462341";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"462383-463448";i:10;s:1:"+";i:11;s:15:"TIA2EST36_02075";i:12;s:0:"";i:13;s:15:"TIA2EST36_02075";i:14;s:6:"Operon";i:15;s:6:"936920";i:16;s:63:"TIA2EST36_02070;TIA2EST36_02075;TIA2EST36_02080;TIA2EST36_02085";i:17;s:0:"";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 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";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"565698-565809";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"564181-564451";i:10;s:1:"-";i:11;s:15:"TIA2EST36_02570";i:12;s:0:"";i:13;s:15:"TIA2EST36_02570";i:14;s:6:"Operon";i:15;s:6:"936945";i:16;s:69:"TIA2EST36_02560;TIA2EST36_02565(thiG);TIA2EST36_02570;TIA2EST36_02575";i:17;s:0:"";i:18;s:15:"View Structure ";}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"648176-648428";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"648507-650418";i:10;s:1:"+";i:11;s:15:"TIA2EST36_02975";i:12;s:0:"";i:13;s:15:"TIA2EST36_02975";i:14;s:6:"Operon";i:15;s:6:"936967";i:16;s:47:"TIA2EST36_02975;TIA2EST36_02980;TIA2EST36_02985";i:17;s:0:"";i:18;s:15:"View Structure ";}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"711461-711647";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"711687-712701";i:10;s:1:"+";i:11;s:15:"TIA2EST36_03280";i:12;s:0:"";i:13;s:15:"TIA2EST36_03280";i:14;s:6:"Operon";i:15;s:6:"936981";i:16;s:63:"TIA2EST36_03280;TIA2EST36_03285;TIA2EST36_03290;TIA2EST36_03295";i:17;s:0:"";i:18;s:15:"View Structure ";}i:11;a:19:{i:0;i:11;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"855178-855320";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"855695-856967";i:10;s:1:"+";i:11;s:15:"TIA2EST36_03945";i:12;s:0:"";i:13;s:15:"TIA2EST36_03945";i:14;s:11:"Single gene";i:15;s:7:"3311912";i:16;s:15:"TIA2EST36_03945";i:17;s:0:"";i:18;s:15:"View Structure ";}i:12;a:19:{i:0;i:12;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"937562-937675";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"938463-939114";i:10;s:1:"+";i:11;s:15:"TIA2EST36_04385";i:12;s:0:"";i:13;s:15:"TIA2EST36_04385";i:14;s:6:"Operon";i:15;s:6:"937030";i:16;s:63:"TIA2EST36_04380;TIA2EST36_04385;TIA2EST36_04390;TIA2EST36_04395";i:17;s:0:"";i:18;s:15:"View Structure ";}i:13;a:19:{i:0;i:13;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1772473-1772544";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"1769711-1770101";i:10;s:1:"-";i:11;s:15:"TIA2EST36_08140";i:12;s:0:"";i:13;s:15:"TIA2EST36_08140";i:14;s:11:"Single gene";i:15;s:7:"3312080";i:16;s:15:"TIA2EST36_08140";i:17;s:0:"";i:18;s:15:"View Structure ";}i:14;a:19:{i:0;i:14;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1865543-1865677";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1864473-1865469";i:10;s:1:"-";i:11;s:15:"TIA2EST36_08590";i:12;s:0:"";i:13;s:15:"TIA2EST36_08590";i:14;s:6:"Operon";i:15;s:6:"937205";i:16;s:113:"TIA2EST36_08565(purH);TIA2EST36_08570(purN);TIA2EST36_08575(ribH);TIA2EST36_08580;TIA2EST36_08585;TIA2EST36_08590";i:17;s:0:"";i:18;s:15:"View Structure ";}i:15;a:19:{i:0;i:15;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2232784-2232984";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2233095-2235666";i:10;s:1:"+";i:11;s:15:"TIA2EST36_10310";i:12;s:0:"";i:13;s:15:"TIA2EST36_10310";i:14;s:6:"Operon";i:15;s:6:"937280";i:16;s:37:"TIA2EST36_10310;TIA2EST36_10315(nrdF)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:16;a:19:{i:0;i:16;i:1;s:11:"NC_016511.1";i:2;s:40:"Propionibacterium acnes TypeIA2 P.acn31 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2255849-2256090";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2253430-2255773";i:10;s:1:"-";i:11;s:15:"TIA2EST36_10410";i:12;s:0:"";i:13;s:15:"TIA2EST36_10410";i:14;s:6:"Operon";i:15;s:6:"937285";i:16;s:31:"TIA2EST36_10405;TIA2EST36_10410";i:17;s:0:"";i:18;s:15:"View Structure ";}}
