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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
571310-571510
(-)
cobalamin
568575-571197 (-)
FCOL_02460
TonB-dependent receptor
FCOL_02460
Operon
DOOR ID:
1319444
FCOL_02460,
FCOL_02455,
FCOL_02450,
FCOL_02445,
FCOL_02440,
FCOL_02435,
FCOL_02430,
FCOL_02425,
FCOL_02420,
FCOL_02415,
FCOL_02410,
FCOL_02405,
FCOL_02400,
FCOL_02395,
FCOL_02390
View Structure
2
929265-929383
(-)
SAM
928192-929182 (-)
FCOL_03965
Homocysteine S-methyltransferase
FCOL_03965
Operon
DOOR ID:
1319502
FCOL_03965,
FCOL_03960
View Structure
3
1190651-1190930
(-)
cobalamin
1188672-1190583 (-)
FCOL_05040
Putative TonB-dependent outer membrane receptor
FCOL_05040
Single gene
DOOR ID:
3310968
FCOL_05040
View Structure
4
2093028-2093122
(+)
TPP
2093179-2093386 (+)
FCOL_08940
Thiamine biosynthesis protein ThiS
FCOL_08940
Single gene
DOOR ID:
3311300
FCOL_08940
View Structure
5
2238605-2238714
(-)
TPP
2236243-2238526 (-)
FCOL_09555
TonB-dependent receptor
FCOL_09555
Single gene
DOOR ID:
3311347
FCOL_09555
View Structure
Genome:
Flavobacterium columnare ATCC 49512
(
NC_016510.2
);
Phylum:
Bacteroidetes/Chlorobi group
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