Genome: Gluconacetobacter xylinus NBRC 3288 (NC_016027.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1360953-1361031 (+)fluoride1361031-1361976 (+)GLX_11890

Universal stress protein
GLX_11890Operon

DOOR ID: 926216
GLX_11890,
GLX_11900
View Structure
2 1376457-1376698 (-)cobalamin1374141-1375125 (-)GLX_12030

GLX_12030Operon

DOOR ID: 926220
GLX_12020,
GLX_12030
View Structure
3 1376826-1377072 (+)cobalamin1378752-1379157 (+)GLX_12040

GLX_12040Single gene

DOOR ID: 3281899
GLX_12040 View Structure
4 1378449-1378684 (+)cobalamin1378752-1379157 (+)GLX_12040

GLX_12040Single gene

DOOR ID: 3281899
GLX_12040 View Structure
5 1382039-1382277 (-)cobalamin1379822-1380914 (-)GLX_12050

Ring-hydroxylating dioxygenase ferredoxin subunit
GLX_12050Operon

DOOR ID: 926221
GLX_12050,
GLX_12060
View Structure
6 1387164-1387383 (-)cobalamin1384945-1387045 (-)GLX_12100

TonB-dependent ferrichrome siderophore receptor
GLX_12100Operon

DOOR ID: 926222
GLX_12070,
GLX_12080,
GLX_12090,
GLX_12100
View Structure
7 1392537-1392771 (-)cobalamin1391500-1392406 (-)GLX_12150

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4)
GLX_12150Single gene

DOOR ID: 3281900
GLX_12150 View Structure
8 1394717-1394949 (-)cobalamin1392919-1394650 (-)GLX_12160

Porin
GLX_12160Single gene

DOOR ID: 3281901
GLX_12160 View Structure
9 1557899-1557979 (+)sam-alpha1558113-1559316 (+)GLX_13590

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
GLX_13590Operon

DOOR ID: 926253
GLX_13590,
GLX_13600,
GLX_13610
View Structure
10 1802500-1802693 (+)cobalamin1802714-1804487 (+)GLX_16010

Porin
GLX_16010Operon

DOOR ID: 926293
GLX_16010,
GLX_16020,
GLX_16030
View Structure
11 1964354-1964514 (-)FMN1963219-1964350 (-)ribD

Riboflavin biosynthesis protein
GLX_17500Operon

DOOR ID: 926324
GLX_17470,
GLX_17480,
GLX_17490,
GLX_17500 (ribD)
View Structure
12 1983852-1983948 (+)TPP1985073-1985595 (-)GLX_17700

GLX_17700Single gene

DOOR ID: 3282111
GLX_17700 View Structure
13 2230800-2231034 (-)cobalamin2230232-2230637 (-)GLX_20020

GLX_20020Single gene

DOOR ID: 3282211
GLX_20020 View Structure
14 2238309-2238454 (-)TPP2236364-2238206 (-)GLX_20090

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
GLX_20090Single gene

DOOR ID: 3282218
GLX_20090 View Structure
15 2705039-2705126 (+)glycine2705379-2706513 (+)GLX_24500

Glycine cleavage system T protein
GLX_24500Single gene

DOOR ID: 3282383
GLX_24500 View Structure
16 2787789-2787941 (-)FMN2787150-2787705 (-)GLX_25170

Methyltransferase
GLX_25170Single gene

DOOR ID: 3282409
GLX_25170 View Structure