RiboswitchDB

Genome: Flavobacterium branchiophilum FL-15 (NC_016001.1); Phylum: Bacteroidetes/Chlorobi group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

145027-145121 (+)

TPP

145216-147385 (+)

FBFL15_0124

Probable TonB-dependent outer membrane receptor

Single gene

DOOR ID: 3271960

FBFL15_0124

2

1148167-1148274 (-)

SAM

1147125-1148088 (-)

metX

Homoserine O-acetyltransferase (1)

Operon

DOOR ID: 921767

FBFL15_0978 (thrA2),
FBFL15_0979 (metX)

3

1284032-1284236 (-)

cobalamin

1282000-1283950 (-)

FBFL15_1099

Probable TonB-dependent outer membrane receptor

Single gene

DOOR ID: 3272283

FBFL15_1099

4

3047076-3047182 (+)

SAM

3047370-3048348 (+)

FBFL15_2608

Methionine synthase; homocysteine S-methyltransferase domain (3)

Single gene

DOOR ID: 3272835

FBFL15_2608

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