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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
81517-81622
(-)
TPP
79549-81433 (-)
Rhom172_0075
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Rhom172_0075
Single gene
DOOR ID:
3266055
Rhom172_0075
View Structure
2
476746-476869
(-)
cobalamin
473770-476551 (-)
Rhom172_0426
Vitamin B12-dependent ribonucleotide reductase
Rhom172_0426
Single gene
DOOR ID:
3266160
Rhom172_0426
View Structure
3
1293801-1293925
(-)
SAM
1292479-1293640 (-)
Rhom172_1119
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Rhom172_1119
Single gene
DOOR ID:
3266365
Rhom172_1119
View Structure
4
2215432-2215558
(-)
SAM
2213935-2215264 (-)
Rhom172_1937
O-acetylhomoserine/O-acetylserine sulfhydrylase (7)
Rhom172_1937
Single gene
DOOR ID:
3266631
Rhom172_1937
View Structure
5
3073031-3073285
(-)
cobalamin
3071000-3073004 (-)
Rhom172_2690
TonB-dependent receptor
Rhom172_2690
Operon
DOOR ID:
918980
Rhom172_2688,
Rhom172_2689,
Rhom172_2690
View Structure
Genome:
Rhodothermus marinus SG0.5JP17-172
(
NC_015966.1
);
Phylum:
Bacteroidetes/Chlorobi group
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