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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
196008-196129
(-)
glycine
194549-195920 (-)
PARA_01960
PARA_01960
Single gene
DOOR ID:
3265473
PARA_01960
View Structure
2
378572-378637
(+)
PreQ1
378826-379000 (+)
PARA_03760
PARA_03760
Operon
DOOR ID:
918075
PARA_03750,
PARA_03760
View Structure
3
458036-458210
(-)
FMN
457299-457947 (-)
PARA_04630
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
PARA_04630
Single gene
DOOR ID:
3265542
PARA_04630
View Structure
4
1152643-1152734
(-)
TPP
1151841-1152567 (-)
PARA_11480
PARA_11480
Operon
DOOR ID:
918235
PARA_11410,
PARA_11420,
PARA_11430,
PARA_11440,
PARA_11450,
PARA_11460,
PARA_11470,
PARA_11480
View Structure
5
1715983-1716124
(-)
MOCO
1714409-1714970 (-)
PARA_16740
Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)
PARA_16740
Operon
DOOR ID:
918341
PARA_16720,
PARA_16730,
PARA_16740,
PARA_16750
View Structure
6
1850286-1850463
(-)
lysine
1848704-1850225 (-)
PARA_17990
PARA_17990
Single gene
DOOR ID:
3265968
PARA_17990
View Structure
7
1901124-1901168
(+)
PreQ1
1901169-1901847 (+)
PARA_18470
7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
PARA_18470
Single gene
DOOR ID:
3265986
PARA_18470
View Structure
8
2037934-2038026
(-)
TPP
2036899-2037898 (-)
PARA_19620
Thiamin transporter subunit
PARA_19620
Operon
DOOR ID:
918396
PARA_19590,
PARA_19600,
PARA_19610,
PARA_19620
View Structure
Genome:
Haemophilus parainfluenzae T3T1
(
NC_015964.1
);
Phylum:
Gammaproteobacteria
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