Genome: Thermoanaerobacter wiegelii Rt8.B1 (NC_015958.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 24375-24489 (+)FMN24573-25656 (+)Thewi_0021

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Thewi_0021Operon

DOOR ID: 917461
Thewi_0021,
Thewi_0022,
Thewi_0023,
Thewi_0024
View Structure
2 62539-62598 (+)fluoride62658-63060 (+)Thewi_0062

Putative fluoride ion transporter CrcB
Thewi_0062Operon

DOOR ID: 917466
Thewi_0062,
Thewi_0063
View Structure
3 320096-320201 (-)glycine318840-319947 (-)Thewi_0294

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Thewi_0294Operon

DOOR ID: 917515
Thewi_0291,
Thewi_0292,
Thewi_0293,
Thewi_0294
View Structure
4 407872-407995 (+)MOCO408196-409075 (+)Thewi_0382

Extracellular solute-binding protein family 1
Thewi_0382Single gene

DOOR ID: 3264725
Thewi_0382 View Structure
5 459512-459705 (+)cobalamin459819-460767 (+)Thewi_0429

ABC-type transporter; periplasmic subunit
Thewi_0429Operon

DOOR ID: 917541
Thewi_0429,
Thewi_0430,
Thewi_0431,
Thewi_0432,
Thewi_0433
View Structure
6 577887-577991 (+)SAM578049-579237 (+)Thewi_0557

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Thewi_0557Single gene

DOOR ID: 3264769
Thewi_0557 View Structure
7 629971-630089 (+)FMN630181-630766 (+)Thewi_0605

Riboflavin transporter
Thewi_0605Single gene

DOOR ID: 3264788
Thewi_0605 View Structure
8 688254-688355 (+)purine688496-689951 (+)Thewi_0666

Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (05)
Thewi_0666Operon

DOOR ID: 917582
Thewi_0666,
Thewi_0667
View Structure
9 691591-691692 (+)purine691877-693260 (+)Thewi_0668

Xanthine/uracil/vitamin C permease
Thewi_0668Operon

DOOR ID: 917583
Thewi_0668,
Thewi_0669,
Thewi_0670,
Thewi_0671,
Thewi_0672,
Thewi_0673,
Thewi_0674,
Thewi_0675,
Thewi_0676,
Thewi_0677,
Thewi_0678
View Structure
10 691677-691777 (+)ykkC-yxkD691877-693260 (+)Thewi_0668

Xanthine/uracil/vitamin C permease
Thewi_0668Operon

DOOR ID: 917583
Thewi_0668,
Thewi_0669,
Thewi_0670,
Thewi_0671,
Thewi_0672,
Thewi_0673,
Thewi_0674,
Thewi_0675,
Thewi_0676,
Thewi_0677,
Thewi_0678
View Structure
11 756132-756234 (+)TPP756291-757086 (+)Thewi_0724

Phosphomethylpyrimidine kinase
Thewi_0724Operon

DOOR ID: 917594
Thewi_0724,
Thewi_0725,
Thewi_0726,
Thewi_0727,
Thewi_0728
View Structure
12 883175-883353 (+)lysine883468-883855 (+)Thewi_0849

Acyl-CoA hydrolase
Thewi_0849Operon

DOOR ID: 917615
Thewi_0849,
Thewi_0850,
Thewi_0851,
Thewi_0852,
Thewi_0853,
Thewi_0854,
Thewi_0855,
Thewi_0856
View Structure
13 948288-948375 (+)c-di-GMP-I948428-949730 (+)Thewi_0909

Sigma 54 interacting domain protein
Thewi_0909single gene

DOOR ID: 3264873
Thewi_0909 View Structure
14 1004719-1004851 (+)ydaO-yuaA1004856-1005780 (+)Thewi_0966

NLP/P60 protein
Thewi_0966Single gene

DOOR ID: 3264897
Thewi_0966 View Structure
15 1043196-1043327 (+)ydaO-yuaA1043428-1044529 (+)Thewi_1012

NAD/NADP octopine/nopaline dehydrogenase
Thewi_1012Operon

DOOR ID: 917646
Thewi_1012,
Thewi_1013
View Structure
16 1142362-1142488 (+)ydaO-yuaA1143341-1143902 (-)Thewi_1114

Thewi_1114Single gene

DOOR ID: 3264938
Thewi_1114 View Structure
17 1237154-1237236 (+)c-di-GMP-II1237262-1238939 (+)Thewi_1211

Type II secretion system protein E
Thewi_1211Operon

DOOR ID: 917681
Thewi_1211,
Thewi_1212,
Thewi_1213,
Thewi_1214
View Structure
18 1470658-1470780 (+)SAM1470850-1471885 (+)Thewi_1473

Methionine import ATP-binding protein MetN
Thewi_1473Operon

DOOR ID: 917723
Thewi_1473,
Thewi_1474,
Thewi_1475,
Thewi_1476
View Structure
19 1769289-1769393 (-)SAM1768313-1769225 (-)Thewi_1766

Methylenetetrahydrofolate reductase (0)
Thewi_1766Operon

DOOR ID: 917773
Thewi_1764,
Thewi_1765,
Thewi_1766
View Structure
20 1834094-1834314 (-)cobalamin1831902-1833981 (-)Thewi_1825

Anaerobic ribonucleoside-triphosphate reductase
Thewi_1825Operon

DOOR ID: 917785
Thewi_1824,
Thewi_1825
View Structure
21 1856672-1856731 (-)fluoride1854803-1856567 (-)Thewi_1850

Dynamin family protein
Thewi_1850Single gene

DOOR ID: 3265120
Thewi_1850 View Structure
22 1941297-1941333 (-)PreQ11939802-1940030 (-)Thewi_1929

Thewi_1929Single gene

DOOR ID: 3265146
Thewi_1929 View Structure
23 1968874-1969063 (+)lysine1969186-1970524 (+)Thewi_1954

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)
Thewi_1954Single gene

DOOR ID: 3265148
Thewi_1954 View Structure
24 2084446-2084556 (-)SAM2083094-2084378 (-)Thewi_2051

Homoserine dehydrogenase
Thewi_2051Operon

DOOR ID: 917823
Thewi_2049,
Thewi_2050,
Thewi_2051
View Structure
25 2088431-2088538 (+)TPP2088583-2089882 (+)Thewi_2055

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Thewi_2055Single gene

DOOR ID: 3265183
Thewi_2055 View Structure
26 2223064-2223218 (-)glmS2221202-2223029 (-)Thewi_2175

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Thewi_2175Single gene

DOOR ID: 3265217
Thewi_2175 View Structure
27 2517123-2517196 (-)fluoride2515516-2517052 (-)Thewi_2496

DNA mismatch repair protein MutS domain protein
Thewi_2496Operon

DOOR ID: 917905
Thewi_2495,
Thewi_2496
View Structure
28 2555150-2555312 (-)ykoK2552092-2554780 (-)Thewi_2526

Magnesium-translocating P-type ATPase
Thewi_2526Single gene

DOOR ID: 3265293
Thewi_2526 View Structure
29 2557396-2557498 (-)TPP2556694-2557333 (-)Thewi_2528

Proton-coupled thiamine transporter YuaJ
Thewi_2528Single gene

DOOR ID: 3265295
Thewi_2528 View Structure