Genome: Streptomyces sp. SirexAA-E (NC_015953.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 384814-385000 (-)cobalamin383707-384757 (-)SACTE_0348

Periplasmic binding protein		SACTE_0348Operon

DOOR ID: 1199053		SACTE_0348,
SACTE_0347,
SACTE_0346		 View Structure
2 741278-741446 (+)ydaO-yuaA741448-741919 (+)SACTE_0654

NLP/P60 protein		SACTE_0654Single gene

DOOR ID: 3256333		SACTE_0654 View Structure
3 906060-906156 (-)glycine902978-905864 (-)SACTE_0800

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		SACTE_0800Single gene

DOOR ID: 3256410		SACTE_0800 View Structure
4 981750-981880 (-)FMN980487-981588 (-)SACTE_0859

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		SACTE_0859Operon

DOOR ID: 1199140		SACTE_0852,
SACTE_0853,
SACTE_0854,
SACTE_0855,
SACTE_0856,
SACTE_0857,
SACTE_0858,
SACTE_0859		 View Structure
5 1430704-1430834 (+)cobalamin1430962-1431937 (+)SACTE_1274

Cobalamin biosynthesis protein CobD		SACTE_1274Operon

DOOR ID: 1199224		SACTE_1274,
SACTE_1275,
SACTE_1276,
SACTE_1277,
SACTE_1278		 View Structure
6 1495652-1495799 (-)cobalamin1495393-1495615 (-)SACTE_1333

SACTE_1333Operon

DOOR ID: 1199234		SACTE_1332,
SACTE_1333		 View Structure
7 1723441-1723554 (+)TPP1724741-1725038 (+)SACTE_1540

Thiamine biosynthesis protein ThiS		SACTE_1540Operon

DOOR ID: 1199277		SACTE_1539,
SACTE_1540,
SACTE_1541		 View Structure
8 1758043-1758160 (-)SAM-IV1756492-1757869 (-)SACTE_1572

Cysteine desulfurase 		SACTE_1572Single gene

DOOR ID: 3256731		SACTE_1572 View Structure
9 2652576-2652642 (-)ykkC-III2652215-2652536 (-)SACTE_2372

SACTE_2372single gene

DOOR ID: 3257089		SACTE_2372 View Structure
10 2883609-2883746 (-)ydaO-yuaA2882891-2883608 (-)SACTE_2557

Transglycosylase domain protein		SACTE_2557Single gene

DOOR ID: 3257193		SACTE_2557 View Structure
11 3745932-3746065 (+)TPP3748011-3748833 (-)SACTE_3362

Putative transmembrane protein		SACTE_3362Single gene

DOOR ID: 3257602		SACTE_3362 View Structure
12 3851725-3851797 (+)cobalamin3851851-3855451 (+)SACTE_3452

Cobaltochelatase; CobN subunit 		SACTE_3452Single gene

DOOR ID: 3257651		SACTE_3452 View Structure
13 3946762-3946916 (+)ydaO-yuaA3946927-3947968 (+)SACTE_3536

Peptidase M23		SACTE_3536Single gene

DOOR ID: 3257684		SACTE_3536 View Structure
14 4128701-4128828 (+)SAM4128846-4130145 (+)SACTE_3713

Threonine synthase		SACTE_3713Operon

DOOR ID: 1199656		SACTE_3713,
SACTE_3714		 View Structure
15 4494579-4494769 (-)ydaO-yuaA4491986-4492340 (+)SACTE_4061

Putative integral membrane protein		SACTE_4061Single gene

DOOR ID: 3257918		SACTE_4061 View Structure
16 4711649-4711777 (+)cobalamin4711829-4713410 (+)SACTE_4268

Extracellular solute-binding protein family 5		SACTE_4268Operon

DOOR ID: 1199757		SACTE_4268,
SACTE_4269,
SACTE_4270,
SACTE_4271,
SACTE_4272		 View Structure
17 4936531-4936673 (-)cobalamin4933984-4936396 (-)SACTE_4463

Ribonucleoside-diphosphate reductase 		SACTE_4463Operon

DOOR ID: 1199795		SACTE_4462,
SACTE_4463		 View Structure
18 5168717-5168813 (-)glycine5167457-5168573 (-)SACTE_4671

Aminomethyltransferase (0) (Glycine cleavage system T protein)		SACTE_4671Operon

DOOR ID: 1199839		SACTE_4669,
SACTE_4670,
SACTE_4671		 View Structure
19 5353470-5353585 (+)TPP5353655-5354741 (+)SACTE_4834

ABC transporter; periplasmic binding protein; thiB subfamily		SACTE_4834Operon

DOOR ID: 1199879		SACTE_4834,
SACTE_4835,
SACTE_4836		 View Structure
20 5571697-5571863 (+)ydaO-yuaA5571875-5572667 (+)SACTE_5005

Peptidase M23		SACTE_5005Single gene

DOOR ID: 3258334		SACTE_5005 View Structure
21 5680109-5680326 (-)cobalamin5677635-5679948 (-)SACTE_5081

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		SACTE_5081Single gene

DOOR ID: 3258362		SACTE_5081 View Structure
22 5696296-5696481 (+)ydaO-yuaA5696485-5697364 (+)SACTE_5096

Lytic transglycosylase catalytic		SACTE_5096Single gene

DOOR ID: 3258370		SACTE_5096 View Structure
23 6400484-6400566 (-)yybP-ykoY6399759-6400344 (-)SACTE_5638

SACTE_5638Single gene

DOOR ID: 3258603		SACTE_5638 View Structure
24 6752140-6752311 (+)ydaO-yuaA6752315-6753236 (+)SACTE_5933

Peptidase M23		SACTE_5933Single gene

DOOR ID: 3258726		SACTE_5933 View Structure
25 7113868-7113996 (-)cobalamin7112681-7113674 (-)SACTE_6265

Transport system permease protein		SACTE_6265Operon

DOOR ID: 1200140		SACTE_6263,
SACTE_6264,
SACTE_6265		 View Structure