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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1131068-1131161
(-)
TPP
1128734-1130984 (-)
Murru_1030
TonB-dependent receptor
Murru_1030
Single gene
DOOR ID:
3251035
Murru_1030
View Structure
2
2152597-2152705
(+)
SAM
2152816-2154091 (+)
Murru_1953
O-acetylhomoserine/O-acetylserine sulfhydrylase (7)
Murru_1953
Operon
DOOR ID:
913343
Murru_1953,
Murru_1954,
Murru_1955,
Murru_1956
View Structure
3
2168803-2168913
(+)
SAM
2169019-2170021 (+)
Murru_1966
Methionine synthase (3)
Murru_1966
Operon
DOOR ID:
913345
Murru_1966,
Murru_1967,
Murru_1968
View Structure
4
2484478-2484585
(+)
TPP
2484640-2485240 (+)
Murru_2268
Nicotinamide mononucleotide transporter PnuC
Murru_2268
Operon
DOOR ID:
913418
Murru_2268,
Murru_2269
View Structure
5
2870611-2870703
(-)
TPP
2869736-2870540 (-)
Murru_2596
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
Murru_2596
Operon
DOOR ID:
913490
Murru_2591,
Murru_2592,
Murru_2593,
Murru_2594,
Murru_2595,
Murru_2596
View Structure
6
3612983-3613216
(-)
cobalamin
3611051-3612914 (-)
Murru_3284
TonB-dependent receptor
Murru_3284
Operon
DOOR ID:
913633
Murru_3283,
Murru_3284
View Structure
Genome:
Muricauda ruestringensis DSM 13258
(
NC_015945.1
);
Phylum:
Bacteroidetes/Chlorobi group
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