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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
462527-462653
(+)
glycine
462713-465620 (+)
gcvP
Glycine dehydrogenase (aminomethyl-transferring)
CVAR_0391
Operon
DOOR ID:
907229
CVAR_0391
(gcvP)
,
CVAR_0392,
CVAR_0393
(gcvH)
,
CVAR_0394,
CVAR_0395
(pyrE)
,
CVAR_0396
View Structure
2
478298-478401
(-)
TPP
477526-478285 (-)
CVAR_0405
ABC transport system ATP-binding protein (1)
CVAR_0405
Operon
DOOR ID:
907233
CVAR_0403,
CVAR_0404,
CVAR_0405
View Structure
3
1277821-1277929
(-)
TPP
1276433-1276649 (-)
thiS
Thiamine biosynthesis protein
CVAR_3048
Operon
DOOR ID:
907389
CVAR_1107
(thiF)
,
CVAR_1108
(thiG)
,
CVAR_3048
(thiS)
,
CVAR_1109
(thiO)
View Structure
4
1509079-1509173
(-)
TPP
1507563-1508172 (-)
thiE1
Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
CVAR_1310
Operon
DOOR ID:
907437
CVAR_1309
(thiD)
,
CVAR_1310
(thiE1)
,
CVAR_1311
(thiM)
View Structure
5
1995190-1995252
(+)
ykkC-III
1995266-1995581 (+)
CVAR_1731
CVAR_1731
single gene
DOOR ID:
3242327
CVAR_1731
View Structure
6
2272986-2273096
(+)
TPP
2274778-2275534 (-)
CVAR_1996
Probable membrane transporter protein
CVAR_1996
Single gene
DOOR ID:
3242412
CVAR_1996
View Structure
7
2313408-2313540
(+)
FMN
2313549-2314347 (+)
CVAR_2033
Putative membrane protein
CVAR_2033
Single gene
DOOR ID:
3242417
CVAR_2033
View Structure
8
2339789-2339889
(-)
TPP
2338261-2339104 (-)
tatD
Deoxyribonuclease
CVAR_2053
Operon
DOOR ID:
907603
CVAR_2053
(tatD)
,
CVAR_2054
View Structure
9
2971553-2971652
(+)
TPP
2971710-2972478 (+)
CVAR_2643
CVAR_2643
Operon
DOOR ID:
907738
CVAR_2643,
CVAR_2644
View Structure
Genome:
Corynebacterium variabile DSM 44702
(
NC_015859.1
);
Phylum:
Actinobacteria
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