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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
228204-228310
(-)
TPP
227241-228117 (-)
thiD
BPI_I219
Operon
DOOR ID:
906755
BPI_I212,
BPI_I213,
BPI_I214,
BPI_I215
(thiE)
,
BPI_I216
(thiG)
,
BPI_I217
(thiS)
,
BPI_I218
(thiO)
,
BPI_I219
(thiD)
View Structure
2
339842-339921
(-)
sam-alpha
338554-339751 (-)
metZ
BPI_I340
Single gene
DOOR ID:
3240431
BPI_I340
(metZ)
View Structure
3
1300138-1300375
(-)
cobalamin
1299898-1300087 (-)
cbtB
BPI_I1362
Operon
DOOR ID:
906974
BPI_I1356,
BPI_I1357
(cobO)
,
BPI_I1358
(cobN)
,
BPI_I1359
(cobW)
,
BPI_I1360
(cobU)
,
BPI_I1361
(cbtA)
,
BPI_I1362
(cbtB)
View Structure
4
1339169-1339397
(-)
cobalamin
1337149-1339012 (-)
BPI_I1398
BPI_I1398
Operon
DOOR ID:
906981
BPI_I1395,
BPI_I1396,
BPI_I1397,
BPI_I1398
View Structure
5
1719734-1719904
(+)
TPP
1719942-1720950 (+)
thiB
BPI_I1817
Operon
DOOR ID:
907060
BPI_I1817
(thiB)
,
BPI_I1818
(thiPQ)
View Structure
Genome:
Brucella pinnipedialis B2/94 chromosome I
(
NC_015857.1
);
Phylum:
Alphaproteobacteria
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