Genome: Collimonas fungivorans Ter331 (NC_015856.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 841608-841715 (+)TPP841811-843734 (+)CFU_0715

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
CFU_0715Single gene

DOOR ID: 3238941
CFU_0715 View Structure
2 3605103-3605284 (+)SAH3605983-3606694 (-)lolD

Lipoprotein-releasing system ATP-binding protein LolD

DOOR ID: 906434
CFU_3067 (lolD),
View Structure
3 3763333-3763387 (-)mini-ykkC3762611-3762998 (+)CFU_3210


DOOR ID: 906462
View Structure
4 3764947-3765123 (-)yybP-ykoY3763816-3764842 (-)CFU_3213

Putative Ca2+/Na+ antiporter
CFU_3213Single gene

DOOR ID: 3239828
CFU_3213 View Structure
5 3974782-3974907 (-)ZMP-ZTP3973447-3974707 (-)glyA2

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
CFU_3400Single gene

DOOR ID: 3239907
CFU_3400 (glyA2) View Structure
6 4076395-4076629 (-)cobalamin4074422-4076300 (-)btuB

Outer membrane vitamin B12 receptor BtuB

DOOR ID: 906521
CFU_3487 (hmuU),
CFU_3488 (btuB)
View Structure
7 4724242-4724316 (-)SAH4722772-4724200 (-)acyH

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)

DOOR ID: 906632
CFU_4026 (metF),
CFU_4027 (yvlD),
CFU_4028 (acyH)
View Structure
8 4767895-4768063 (-)FMN4767215-4767863 (-)ribH2

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
CFU_4069Single gene

DOOR ID: 3240161
CFU_4069 (ribH2) View Structure
9 4924999-4925097 (-)fluoride4923663-4924890 (-)eriC

Chloride channel protein
CFU_4221Single gene

DOOR ID: 3240211
CFU_4221 (eriC) View Structure