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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
251484-251652
(-)
lysine
249879-251355 (-)
WKK_01280
Lysine-specific permease
WKK_01280
Single gene
DOOR ID:
3230640
WKK_01280
View Structure
2
359074-359201
(-)
THF
358473-359034 (-)
WKK_01770
WKK_01770
Single gene
DOOR ID:
3230666
WKK_01770
View Structure
3
467724-467818
(-)
TPP
466828-467608 (-)
WKK_02285
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
WKK_02285
Operon
DOOR ID:
901252
WKK_02270,
WKK_02275,
WKK_02280,
WKK_02285
View Structure
4
708107-708242
(-)
FMN
707394-707961 (-)
WKK_03450
Riboflavin transporter
WKK_03450
Single gene
DOOR ID:
3230769
WKK_03450
View Structure
5
766349-766393
(-)
SAM-SAH
764667-765258 (-)
WKK_03760
TerR family transcriptional regulator
WKK_03760
Operon
DOOR ID:
901304
WKK_03755,
WKK_03760
View Structure
6
997585-997664
(+)
PreQ1
997668-998163 (+)
WKK_04745
WKK_04745
Operon
DOOR ID:
901346
WKK_04745,
WKK_04750
(fabG)
View Structure
7
1070829-1070925
(+)
purine
1071083-1072376 (+)
WKK_05045
Xanthine/uracil permease
WKK_05045
Single gene
DOOR ID:
3230906
WKK_05045
View Structure
8
1154062-1154154
(-)
TPP
1153402-1153966 (-)
WKK_05490
ABC-type cobalt transport system; permease component
WKK_05490
Operon
DOOR ID:
901375
WKK_05480,
WKK_05485,
WKK_05490
View Structure
Genome:
Weissella koreensis KACC 15510
(
NC_015759.1
);
Phylum:
Firmicutes
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