Genome: Pseudomonas stutzeri ATCC 17588 = LMG 11199 (NC_015740.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 783243-783392 (+)FMN783512-784175 (+)ribE

Riboflavin synthase subunit alpha		PSTAB_0723Operon

DOOR ID: 898543		PSTAB_0723 (ribE),
PSTAB_0724		 View Structure
2 795776-795992 (-)cobalamin793768-795676 (-)plug

TonB-dependent receptor		PSTAB_0737Single gene

DOOR ID: 3226346		PSTAB_0737 (plug) View Structure
3 904042-904135 (-)glycine903432-903867 (+)PSTAB_0839

Putative copper export protein		PSTAB_0839Single gene

DOOR ID: 3226382		PSTAB_0839 View Structure
4 1082564-1082686 (-)yybP-ykoY1081884-1082472 (-)PSTAB_1017

PSTAB_1017Single gene

DOOR ID: 3226441		PSTAB_1017 View Structure
5 1342414-1342634 (+)cobalamin1342751-1344605 (+)PSTAB_1282

TonB-dependent receptor		PSTAB_1282Operon

DOOR ID: 898654		PSTAB_1282,
PSTAB_1283,
PSTAB_1284 (cobO),
PSTAB_1285 (cobB),
PSTAB_1286,
PSTAB_1287,
PSTAB_1288 (cobD),
PSTAB_1289 (cobC),
PSTAB_1290 (cobQ),
PSTAB_1291 (cobU),
PSTAB_1292 (cobT),
PSTAB_1293,
PSTAB_1294 (cobS)		 View Structure
6 2010288-2010390 (-)ykkC-yxkD2009237-2010239 (-)PSTAB_1901

ABC-type nitrate/sulfonate/bicarbonate transport system; periplasmic component		PSTAB_1901Operon

DOOR ID: 898767		PSTAB_1892,
PSTAB_1893,
PSTAB_1894,
PSTAB_1895,
PSTAB_1896,
PSTAB_1897,
PSTAB_1898,
PSTAB_1899,
PSTAB_1900,
PSTAB_1901		 View Structure
7 2017346-2017392 (-)mini-ykkC2013722-2017322 (-)PSTAB_1905

PSTAB_1905Operon

DOOR ID: 898768		PSTAB_1902,
PSTAB_1903,
PSTAB_1904,
PSTAB_1905,
PSTAB_1906,
PSTAB_1907,
PSTAB_1908,
PSTAB_1909,
PSTAB_1910		 View Structure
8 2020690-2020787 (-)ykkC-yxkD2019742-2020558 (-)PSTAB_1910

ABC transporter; permease protein		PSTAB_1910Operon

DOOR ID: 898768		PSTAB_1902,
PSTAB_1903,
PSTAB_1904,
PSTAB_1905,
PSTAB_1906,
PSTAB_1907,
PSTAB_1908,
PSTAB_1909,
PSTAB_1910		 View Structure
9 3514009-3514097 (-)SAH3512268-3513462 (-)lyS

Carboxynorspermidine dehydrogenase		PSTAB_3290Operon

DOOR ID: 899066		PSTAB_3290 (lyS),
PSTAB_3291 (nspC)		 View Structure
10 3733691-3733737 (-)mini-ykkC3733349-3733670 (-)sugE

PSTAB_3464Single gene

DOOR ID: 3227415		PSTAB_3464 (sugE) View Structure
11 4062009-4062115 (-)TPP4060028-4061912 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		PSTAB_3772Single gene

DOOR ID: 3227531		PSTAB_3772 (thiC) View Structure
12 4202174-4202260 (+)SAH4202284-4203691 (+)sahH

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		PSTAB_3896Operon

DOOR ID: 899198		PSTAB_3896 (sahH),
PSTAB_3897 (metF)		 View Structure
13 4421947-4422035 (-)glycine4420528-4421788 (-)PSTAB_4092

D-amino acid dehydrogenase small subunit		PSTAB_4092Single gene

DOOR ID: 3227647		PSTAB_4092 View Structure