Genome: Roseobacter litoralis Och 149 (NC_015730.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 543970-544019 (+)SAM-SAH544023-545205 (+)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		RLO149_c005160Operon

DOOR ID: 894598		RLO149_c005120,
RLO149_c005130,
RLO149_c005140,
RLO149_c005150 (lnt),
RLO149_c005160 (metK)		 View Structure
2 644438-644634 (+)cobalamin644723-645101 (+)RLO149_c006150

RLO149_c006150Operon

DOOR ID: 894620		RLO149_c006150,
RLO149_c006160 (cobW),
RLO149_c006170 (cobN),
RLO149_c006180 (cobG),
RLO149_c006190 (cobH),
RLO149_c006200 (cobI),
RLO149_c006210 (cobJ)		 View Structure
3 920623-920712 (-)TPP919802-920576 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		RLO149_c008560Operon

DOOR ID: 894667		RLO149_c008540 (thiD2),
RLO149_c008550 (thiE1),
RLO149_c008560 (thiM)		 View Structure
4 935916-936004 (-)TPP935358-935580 (+)RLO149_c008760

RLO149_c008760Single gene

DOOR ID: 3217859		RLO149_c008760 View Structure
5 1075968-1076044 (+)sam-alpha1076106-1077288 (+)metZ

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase) 		RLO149_c010350Single gene

DOOR ID: 3217914		RLO149_c010350 (metZ) View Structure
6 2748648-2748868 (-)cobalamin2748139-2748544 (-)RLO149_c026850

RLO149_c026850Operon

DOOR ID: 895051		RLO149_c026820,
RLO149_c026830,
RLO149_c026840,
RLO149_c026850		 View Structure
7 2865875-2865963 (-)glycine2864499-2865720 (-)RLO149_c028050

Putative D-amino acid dehydrogenase; small subunit		RLO149_c028050Single gene

DOOR ID: 3218502		RLO149_c028050 View Structure
8 3611485-3611573 (-)glycine3610204-3611329 (-)gcvT

Glycine cleavage T-protein GcvT (0)		RLO149_c035590Operon

DOOR ID: 895236		RLO149_c035570 (gcvP),
RLO149_c035580 (gcvH),
RLO149_c035590 (gcvT)		 View Structure
9 4023699-4023802 (-)TPP4022861-4023641 (-)thiD1

Phosphomethylpyrimidine kinase ThiD 		RLO149_c039700Operon

DOOR ID: 895310		RLO149_c039600,
RLO149_c039610 (thi4),
RLO149_c039620,
RLO149_c039630,
RLO149_c039640 (thi5),
RLO149_c039650 (thiF),
RLO149_c039660 (thiE2),
RLO149_c039670 (thiG),
RLO149_c039680 (thiS),
RLO149_c039690 (thiO),
RLO149_c039700 (thiD1)		 View Structure
10 4091454-4091606 (+)FMN4091686-4092133 (+)ribH2

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)		RLO149_c040460Single gene

DOOR ID: 3218914		RLO149_c040460 (ribH2) View Structure
11 4095462-4095563 (-)TPP4094443-4095424 (-)RLO149_c040490

Thiamine-binding periplasmic protein		RLO149_c040490Operon

DOOR ID: 895325		RLO149_c040470 (thiQ),
RLO149_c040480 (thiP),
RLO149_c040490		 View Structure
12 4112951-4113103 (+)cobalamin4113153-4113834 (+)RLO149_c040700

RLO149_c040700Single gene

DOOR ID: 3218916		RLO149_c040700 View Structure