RiboswitchDB

Genome: Cupriavidus necator N-1 chromosome II (NC_015723.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

483406-483524 (-)

glycine

482080-483349 (-)

dadA1

D-amino acid dehydrogenase small subunit

Single gene

DOOR ID: 3214414

CNE_2c04540 (dadA1)

2

483525-483623 (-)

glycine

482080-483349 (-)

dadA1

D-amino acid dehydrogenase small subunit

Single gene

DOOR ID: 3214414

CNE_2c04540 (dadA1)

3

1268638-1268796 (+)

FMN

1268967-1269651 (+)

ribB2

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)

Single gene

DOOR ID: 3214692

CNE_2c11940 (ribB2)

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";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_015723.1";i:2;s:37:"Cupriavidus necator N-1 chromosome II";i:3;s:18:"Betaproteobacteria";i:4;s:5:"28216";i:5;s:13:"483525-483623";i:6;s:1:"-";i:7;s:7:"glycine";i:8;s:6:"Tandem";i:9;s:13:"482080-483349";i:10;s:1:"-";i:11;s:5:"dadA1";i:12;s:41:"D-amino acid dehydrogenase small subunit ";i:13;s:11:"CNE_2c04540";i:14;s:11:"Single gene";i:15;s:7:"3214414";i:16;s:18:"CNE_2c04540(dadA1)";i:17;s:0:"";i:18;s:15:"View Structure
";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_015723.1";i:2;s:37:"Cupriavidus necator N-1 chromosome II";i:3;s:18:"Betaproteobacteria";i:4;s:5:"28216";i:5;s:15:"1268638-1268796";i:6;s:1:"+";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1268967-1269651";i:10;s:1:"+";i:11;s:5:"ribB2";i:12;s:65:"3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)";i:13;s:11:"CNE_2c11940";i:14;s:11:"Single gene";i:15;s:7:"3214692";i:16;s:18:"CNE_2c11940(ribB2)";i:17;s:44:"riboflavin biosynthetic process [GO:0009231]";i:18;s:15:"View Structure
";}}