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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
3226515-3226762
(+)
cobalamin
3227165-3229064 (+)
LILAB_13625
Putative TonB-dependent receptor
LILAB_13625
Operon
DOOR ID:
889714
LILAB_13625,
LILAB_13630,
LILAB_13635,
LILAB_13640
View Structure
2
3232668-3232881
(+)
cobalamin
3233024-3234494 (+)
LILAB_13645
Putative lipoprotein
LILAB_13645
Operon
DOOR ID:
889715
LILAB_13645,
LILAB_13650,
LILAB_13655
View Structure
3
3292971-3293044
(-)
SAH
3291444-3292875 (-)
LILAB_13900
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
LILAB_13900
Single gene
DOOR ID:
3209013
LILAB_13900
View Structure
4
3453408-3453620
(-)
cobalamin
3451775-3453140 (-)
LILAB_14535
Class III aminotransferase
LILAB_14535
Operon
DOOR ID:
889745
LILAB_14500,
LILAB_14505,
LILAB_14510,
LILAB_14515,
LILAB_14520,
LILAB_14525,
LILAB_14530,
LILAB_14535
View Structure
5
6354481-6354552
(+)
ykkC-III
6354569-6354890 (+)
LILAB_26440
LILAB_26440
operon
DOOR ID:
890211
LILAB_26440,
LILAB_26445
View Structure
6
7138975-7139082
(-)
TPP
7137050-7138925 (-)
LILAB_29315
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
LILAB_29315
Single gene
DOOR ID:
3210345
LILAB_29315
View Structure
7
7444058-7444138
(-)
c-di-GMP-I
7442307-7443969 (-)
LILAB_30345
Uncharacterized protein
LILAB_30345
operon
DOOR ID:
890367
LILAB_30330,
LILAB_30335,
LILAB_30340,
LILAB_30345
View Structure
Genome:
Myxococcus fulvus HW-1
(
NC_015711.1
);
Phylum:
delta/epsilon subdivisions
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