Genome: Clostridium acetobutylicum DSM 1731 (NC_015687.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 179914-180074 (+)glmS180163-181990 (+)glmS

SMB_G0160Single gene

DOOR ID: 3196728		SMB_G0160 (glmS) View Structure
2 453555-453657 (+)SAM453732-454887 (+)mccB

SMB_G0398Operon

DOOR ID: 884050		SMB_G0397,
SMB_G0398 (mccB),
SMB_G0399 (metC)		 View Structure
3 648465-648547 (+)c-di-GMP-II649167-651804 (+)celK

SMB_G0574Single gene

DOOR ID: 3196898		SMB_G0574 (celK) View Structure
4 671237-671342 (-)SAM667523-671162 (-)metH

SMB_G0592Single gene

DOOR ID: 3196907		SMB_G0592 (metH) View Structure
5 682341-682455 (+)FMN682511-683663 (+)ribD

SMB_G0604Operon

DOOR ID: 884093		SMB_G0604 (ribD),
SMB_G0605 (ribE),
SMB_G0606 (ribA),
SMB_G0607 (ribH),
SMB_G0608,
SMB_G0609 (pdxT)		 View Structure
6 704186-704371 (+)lysine704465-705761 (+)lisA

SMB_G0622Single gene

DOOR ID: 3196912		SMB_G0622 (lisA) View Structure
7 789389-789562 (+)ykoK789839-791111 (+)SMB_G0697

SMB_G0697Operon

DOOR ID: 884114		SMB_G0697,
SMB_G0699 (mntH)		 View Structure
8 1001997-1002095 (+)purine1002470-1003778 (+)cpx

SMB_G0889Operon

DOOR ID: 884148		SMB_G0889 (cpx),
SMB_G0890 (xpt)		 View Structure
9 1073606-1073709 (-)SAM1072486-1073398 (+)mccA

SMB_G0948Operon

DOOR ID: 884158		SMB_G0946,
SMB_G0947 (mccB),
SMB_G0948 (mccA)		 View Structure
10 1127229-1127306 (+)ZMP-ZTP1127405-1129637 (+)pflB

SMB_G0997Operon

DOOR ID: 884166		SMB_G0997 (pflB),
SMB_G0998 (pflA)		 View Structure
11 1131358-1131462 (+)SAM1131540-1132503 (+)SMB_G1001

SMB_G1001Operon

DOOR ID: 884167		SMB_G1001,
SMB_G1002,
SMB_G1003 (tpn32)		 View Structure
12 1375839-1375974 (+)ydaO-yuaA1376011-1376773 (+)ykvT

SMB_G1253Single gene

DOOR ID: 3197183		SMB_G1253 (ykvT) View Structure
13 1511550-1511737 (+)cobalamin1511863-1512535 (+)cbiM

SMB_G1388Operon

DOOR ID: 884247		SMB_G1388 (cbiM),
SMB_G1389,
SMB_G1390		 View Structure
14 1543374-1543476 (+)TPP1543530-1544289 (+)ycfH

SMB_G1422Operon

DOOR ID: 884250		SMB_G1420 (purD),
SMB_G1421,
SMB_G1422 (ycfH),
SMB_G1423,
SMB_G1424 (tauC),
SMB_G1425,
SMB_G1426 (tauB)		 View Structure
15 1623483-1623572 (-)glycine1621976-1623344 (-)SMB_G1497

SMB_G1497Single gene

DOOR ID: 3197269		SMB_G1497 View Structure
16 1731999-1732062 (+)fluoride1732110-1732530 (+)crcB1

SMB_G1611Operon

DOOR ID: 884287		SMB_G1611 (crcB1),
SMB_G1612 (crcB2)		 View Structure
17 1977969-1978069 (+)SAM1978168-1979074 (+)metB

SMB_G1850Single gene

DOOR ID: 3197395		SMB_G1850 (metB) View Structure
18 2536262-2536355 (+)THF2536484-2537273 (+)SMB_G2453

SMB_G2453Operon

DOOR ID: 884459		SMB_G2452,
SMB_G2453		 View Structure
19 2559508-2559686 (+)cobalamin2559846-2561262 (+)SMB_G2476

SMB_G2476Operon

DOOR ID: 884465		SMB_G2476,
SMB_G2477,
SMB_G2478 (fepC),
SMB_G2479		 View Structure
20 2563773-2563853 (+)ZMP-ZTP2563898-2565074 (+)purH

SMB_G2480Single gene

DOOR ID: 3197546		SMB_G2480 (purH) View Structure
21 2826481-2826578 (-)purine2824892-2826350 (-)guaB

SMB_G2736Single gene

DOOR ID: 3197681		SMB_G2736 (guaB) View Structure
22 2906575-2906676 (-)purine2904969-2906259 (-)yicO

SMB_G2807Single gene

DOOR ID: 3197710		SMB_G2807 (yicO) View Structure
23 2916359-2916466 (-)SAM2914960-2916244 (-)SMB_G2819

SMB_G2819Single gene

DOOR ID: 3197718		SMB_G2819 View Structure
24 2973433-2973549 (-)FMN2972722-2973352 (-)SMB_G2877

SMB_G2877Single gene

DOOR ID: 3197757		SMB_G2877 View Structure
25 2992924-2993034 (-)SAM2991680-2992856 (-)metK

SMB_G2892Single gene

DOOR ID: 3197764		SMB_G2892 (metK) View Structure
26 3059649-3059756 (-)TPP3059350-3059545 (-)SMB_G2960

SMB_G2960Operon

DOOR ID: 884550		SMB_G2956 (thiE),
SMB_G2957 (thiH),
SMB_G2958 (thiG),
SMB_G2959 (ygdL),
SMB_G2960		 View Structure
27 3062206-3062306 (+)TPP3062407-3063040 (+)thiT

SMB_G2964Single gene

DOOR ID: 3197787		SMB_G2964 (thiT) View Structure
28 3157745-3157893 (-)TPP3156341-3157652 (-)thiC

SMB_G3050Single gene

DOOR ID: 3197827		SMB_G3050 (thiC) View Structure
29 3233717-3233838 (+)ydaO-yuaA3233841-3234426 (+)sleB

SMB_G3117Single gene

DOOR ID: 3197850		SMB_G3117 (sleB) View Structure
30 3251584-3251690 (-)TPP3250673-3251495 (-)thiM

SMB_G3132Operon

DOOR ID: 884582		SMB_G3131 (thiDE),
SMB_G3132 (thiM)		 View Structure
31 3503309-3503472 (-)ykoK3501881-3503117 (-)mntH

SMB_G3366Single gene

DOOR ID: 3197936		SMB_G3366 (mntH) View Structure
32 3652566-3652741 (-)lysine3650889-3652257 (-)SMB_G3491

SMB_G3491Single gene

DOOR ID: 3198012		SMB_G3491 View Structure
33 3754462-3754545 (-)c-di-GMP-II3754026-3754431 (-)SMB_G3597

SMB_G3597Single gene

DOOR ID: 3198082		SMB_G3597 View Structure
34 3803220-3803392 (+)lysine3803483-3804344 (+)dapA2

SMB_G3641Operon

DOOR ID: 884666		SMB_G3640,
SMB_G3641 (dapA2)		 View Structure