About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
809294-809489
(+)
cobalamin
810042-811473 (-)
gapB
CULC22_00749
Single gene
DOOR ID:
3194466
CULC22_00749
(gapB)
View Structure
2
876615-876751
(+)
TPP
877650-879051 (+)
CULC22_00812
CULC22_00812
Operon
DOOR ID:
882927
CULC22_00812,
CULC22_00813,
CULC22_00814,
CULC22_00815,
CULC22_00816
View Structure
3
1012396-1012589
(+)
cobalamin
1012637-1013672 (+)
CULC22_00937
CULC22_00937
Operon
DOOR ID:
882954
CULC22_00937,
CULC22_00938
(cysA2)
,
CULC22_00939,
CULC22_00940
View Structure
4
1579227-1579341
(+)
TPP
1581046-1581745 (+)
thiE
CULC22_01428
Operon
DOOR ID:
883064
CULC22_01427
(thiC)
,
CULC22_01428
(thiE)
,
CULC22_01429
(thiO)
,
CULC22_01430,
CULC22_01431
(thiG)
,
CULC22_01432
(thiF)
,
CULC22_01433
(thiD)
View Structure
Genome:
Corynebacterium ulcerans BR-AD22
(
NC_015683.1
);
Phylum:
Actinobacteria
a:5:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_015683.1";i:2;s:33:"Corynebacterium ulcerans BR-AD22 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"809294-809489";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"810042-811473";i:10;s:1:"-";i:11;s:4:"gapB";i:12;s:0:"";i:13;s:12:"CULC22_00749";i:14;s:11:"Single gene";i:15;s:7:"3194466";i:16;s:18:"CULC22_00749(gapB)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_015683.1";i:2;s:33:"Corynebacterium ulcerans BR-AD22 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"876615-876751";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"877650-879051";i:10;s:1:"+";i:11;s:12:"CULC22_00812";i:12;s:0:"";i:13;s:12:"CULC22_00812";i:14;s:6:"Operon";i:15;s:6:"882927";i:16;s:64:"CULC22_00812;CULC22_00813;CULC22_00814;CULC22_00815;CULC22_00816";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_015683.1";i:2;s:33:"Corynebacterium ulcerans BR-AD22 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1012396-1012589";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"1012637-1013672";i:10;s:1:"+";i:11;s:12:"CULC22_00937";i:12;s:0:"";i:13;s:12:"CULC22_00937";i:14;s:6:"Operon";i:15;s:6:"882954";i:16;s:58:"CULC22_00937;CULC22_00938(cysA2);CULC22_00939;CULC22_00940";i:17;s:0:"";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_015683.1";i:2;s:33:"Corynebacterium ulcerans BR-AD22 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1579227-1579341";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"1581046-1581745";i:10;s:1:"+";i:11;s:4:"thiE";i:12;s:0:"";i:13;s:12:"CULC22_01428";i:14;s:6:"Operon";i:15;s:6:"883064";i:16;s:126:"CULC22_01427(thiC);CULC22_01428(thiE);CULC22_01429(thiO);CULC22_01430;CULC22_01431(thiG);CULC22_01432(thiF);CULC22_01433(thiD)";i:17;s:0:"";i:18;s:15:"View Structure ";}}