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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
548680-548770
(-)
THF
548072-548633 (-)
SGPB_0528
Predicted membrane protein
SGPB_0528
Single gene
DOOR ID:
3169739
SGPB_0528
View Structure
2
587937-588186
(+)
FMN
588403-589459 (+)
ribD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
SGPB_0567
Operon
DOOR ID:
870117
SGPB_0567
(ribD)
,
SGPB_0568
(ribE)
,
SGPB_0569
(ribA)
,
SGPB_0570
(ribH)
View Structure
3
597264-597361
(-)
TPP
596620-597190 (-)
SGPB_0578
Thiamine transporter protein
SGPB_0578
Single gene
DOOR ID:
3169754
SGPB_0578
View Structure
4
673170-673282
(+)
preQ1-II
673285-673795 (+)
SGPB_0645
QueT-like transporter
SGPB_0645
Single gene
DOOR ID:
3169774
SGPB_0645
View Structure
5
929615-929710
(+)
purine
929884-930466 (+)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
SGPB_0891
Operon
DOOR ID:
870180
SGPB_0891
(xpt)
,
SGPB_0892
View Structure
6
1085762-1085851
(-)
TPP
1085007-1085586 (-)
thiW
Thiamine-precursor transporter protein
SGPB_1042
Operon
DOOR ID:
870212
SGPB_1036
(thiE)
,
SGPB_1037
(thiM)
,
SGPB_1038
(thiD.2)
,
SGPB_1039
(tenA)
,
SGPB_1040,
SGPB_1041,
SGPB_1042
(thiW)
View Structure
7
1091457-1091647
(+)
glycine
1091782-1093111 (+)
SGPB_1047
Alanine or glycine:cation symporter
SGPB_1047
Single gene
DOOR ID:
3169889
SGPB_1047
View Structure
8
1660260-1660430
(-)
FMN
1659608-1660178 (-)
SGPB_1598
Riboflavin transporter
SGPB_1598
Single gene
DOOR ID:
3170042
SGPB_1598
View Structure
Genome:
Streptococcus pasteurianus ATCC 43144
(
NC_015600.1
);
Phylum:
Firmicutes
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