RiboswitchDB

Genome: Sphingobium chlorophenolicum L-1 chromosome I (NC_015593.1); Phylum: Alphaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

532436-532686 (+)

cobalamin

532863-535002 (+)

Sphch_0513

TonB-dependent siderophore receptor

Operon

DOOR ID: 868817

Sphch_0513,
Sphch_0514

2

1531770-1531869 (-)

glycine

1530440-1531592 (-)

Sphch_1413

Glycine cleavage system T protein (0)

Single gene

DOOR ID: 3167929

Sphch_1413

3

1828908-1829122 (-)

cobalamin

1826914-1828735 (-)

Sphch_1715

TonB-dependent receptor

Single gene

DOOR ID: 3168043

Sphch_1715

4

2026482-2026591 (-)

yybP-ykoY

2025807-2026386 (-)

Sphch_1905

Single gene

DOOR ID: 3168113

Sphch_1905

5

2138046-2138154 (-)

TPP

2137580-2137988 (-)

Sphch_2006

Operon

DOOR ID: 869130

Sphch_2005,
Sphch_2006

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";}}