Genome: Mycobacterium sp. JDM601 (NC_015576.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 414315-414421 (-)TPP411790-412621 (-)thiD

Phosphomethylpyrimidine kinase ThiD		JDM601_0394Operon

DOOR ID: 1195871		JDM601_0392,
JDM601_0393,
JDM601_0394 (thiD),
JDM601_0395 (thiC)		 View Structure
2 416451-416634 (+)ykoK416865-417069 (+)JDM601_0397

JDM601_0397Single gene

DOOR ID: 3157772		JDM601_0397 View Structure
3 610207-610320 (+)SAM-IV611044-612040 (+)JDM601_0591

Metallophosphoesterase		JDM601_0591Single gene

DOOR ID: 3157842		JDM601_0591 View Structure
4 661147-661258 (-)SAM-IV659807-660314 (-)JDM601_0618

JDM601_0618Single gene

DOOR ID: 3157853		JDM601_0618 View Structure
5 662547-662658 (+)SAM-IV662864-663068 (-)JDM601_0620

JDM601_0620Single gene

DOOR ID: 3157855		JDM601_0620 View Structure
6 858404-858580 (-)ydaO-yuaA857413-858394 (-)rpfA

Resuscitation-promoting factor RpfA		JDM601_0795Single gene

DOOR ID: 3157906		JDM601_0795 (rpfA) View Structure
7 931000-931061 (+)fluoride931109-932870 (+)JDM601_0866

Oxidoreductase molybdopterin-binding protein		JDM601_0866Operon

DOOR ID: 1195985		JDM601_0866,
JDM601_0867,
JDM601_0868,
JDM601_0869		 View Structure
8 1163332-1163531 (-)cobalamin1160916-1163214 (-)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		JDM601_1087Operon

DOOR ID: 1196039		JDM601_1086,
JDM601_1087 (metE)		 View Structure
9 1932380-1932460 (+)SAH1932474-1936203 (+)metH

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		JDM601_1775Operon

DOOR ID: 1196192		JDM601_1775 (metH),
JDM601_1776,
JDM601_1777 (hisE),
JDM601_1778 (hisG),
JDM601_1779		 View Structure
10 2078563-2078748 (+)ykoK2079181-2080387 (+)JDM601_1908

PPE family protein PPE31		JDM601_1908Operon

DOOR ID: 1196223		JDM601_1908,
JDM601_1909 (mgtC),
JDM601_1910 (erg3)		 View Structure
11 2096329-2096426 (+)glycine2096574-2099406 (+)gcvB

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		JDM601_1926Single gene

DOOR ID: 3158296		JDM601_1926 (gcvB) View Structure
12 3364713-3364861 (+)cobalamin3364881-3366858 (+)JDM601_3167

Magnesium chelatase		JDM601_3167Operon

DOOR ID: 1196508		JDM601_3167,
JDM601_3168 (cobO),
JDM601_3169 (cobB),
JDM601_3170 (cobD),
JDM601_3171		 View Structure
13 3380111-3380291 (+)cobalamin3380354-3381518 (+)JDM601_3181

Periplasmic binding protein		JDM601_3181Operon

DOOR ID: 1196512		JDM601_3181,
JDM601_3182,
JDM601_3183,
JDM601_3184		 View Structure
14 3386867-3387051 (-)cobalamin3385115-3386726 (-)JDM601_3185

PPE family protein		JDM601_3185Single gene

DOOR ID: 3158712		JDM601_3185 View Structure
15 3388745-3388853 (-)cobalamin3387043-3388690 (-)JDM601_3186

PPE family protein		JDM601_3186Single gene

DOOR ID: 3158713		JDM601_3186 View Structure
16 3391382-3391502 (+)SAM-IV3391633-3392956 (+)metC

O-acetylhomoserine sulfhydrylase MetC		JDM601_3189Operon

DOOR ID: 1196513		JDM601_3189 (metC),
JDM601_3190 (metX),
JDM601_3191		 View Structure
17 4520174-4520346 (+)ykoK4520637-4520925 (+)JDM601_4234

PE-PGRS family protein		JDM601_4234Operon

DOOR ID: 1196750		JDM601_4234,
JDM601_4235		 View Structure