Genome: Thermoanaerobacterium xylanolyticum LX-11 (NC_015555.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 21510-21623 (+)FMN21686-22769 (+)Thexy_0020

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Thexy_0020Operon

DOOR ID: 1315357		Thexy_0023,
Thexy_0022,
Thexy_0021,
Thexy_0020		 View Structure
2 56776-56836 (+)fluoride56892-57294 (+)Thexy_0049

Putative fluoride ion transporter CrcB		Thexy_0049Operon

DOOR ID: 1315362		Thexy_0050,
Thexy_0049		 View Structure
3 199564-199662 (+)TPP199719-200358 (+)Thexy_0189

Proton-coupled thiamine transporter YuaJ		Thexy_0189Single gene

DOOR ID: 3138721		Thexy_0189 View Structure
4 247660-247783 (+)ydaO-yuaA247891-248992 (+)Thexy_0233

Opine dehydrogenase (8)		Thexy_0233Operon

DOOR ID: 1315399		Thexy_0234,
Thexy_0233		 View Structure
5 400436-400590 (+)glmS400622-402449 (+)Thexy_0394

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Thexy_0394Single gene

DOOR ID: 3138772		Thexy_0394 View Structure
6 527171-527363 (-)lysine525716-527054 (-)Thexy_0507

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		Thexy_0507Single gene

DOOR ID: 3138810		Thexy_0507 View Structure
7 610548-610665 (+)ydaO-yuaA610670-611351 (+)Thexy_0582

NLP/P60 protein		Thexy_0582Single gene

DOOR ID: 3138824		Thexy_0582 View Structure
8 618053-618160 (-)SAM617071-617989 (-)Thexy_0588

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		Thexy_0588Single gene

DOOR ID: 3138827		Thexy_0588 View Structure
9 620966-621029 (+)fluoride621092-622628 (+)Thexy_0592

DNA mismatch repair protein MutS domain protein		Thexy_0592Operon

DOOR ID: 1315464		Thexy_0593,
Thexy_0592		 View Structure
10 624212-624271 (+)fluoride624439-625567 (+)Thexy_0594

Sodium/hydrogen exchanger		Thexy_0594Operon

DOOR ID: 1315465		Thexy_0595,
Thexy_0594		 View Structure
11 627908-627969 (+)fluoride628029-629316 (+)Thexy_0597

Enolase (1) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)		Thexy_0597Single gene

DOOR ID: 3138832		Thexy_0597 View Structure
12 630663-630723 (+)fluoride630799-631132 (+)Thexy_0599

Thexy_0599Operon

DOOR ID: 1315466		Thexy_0601,
Thexy_0600,
Thexy_0599		 View Structure
13 634637-634739 (+)SAM634868-636161 (+)Thexy_0603

O-acetylhomoserine/O-acetylserine sulfhydrylase (7)		Thexy_0603Single gene

DOOR ID: 3138835		Thexy_0603 View Structure
14 712923-713049 (+)FMN713109-713694 (+)Thexy_0668

Riboflavin transporter		Thexy_0668Single gene

DOOR ID: 3138862		Thexy_0668 View Structure
15 745210-745307 (+)purine745391-746846 (+)Thexy_0706

Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (05)		Thexy_0706Operon

DOOR ID: 1315487		Thexy_0707,
Thexy_0706		 View Structure
16 748479-748580 (+)purine748771-750220 (+)Thexy_0708

Xanthine/uracil/vitamin C permease		Thexy_0708Operon

DOOR ID: 1315488		Thexy_0715,
Thexy_0714,
Thexy_0713,
Thexy_0712,
Thexy_0711,
Thexy_0710,
Thexy_0709,
Thexy_0708		 View Structure
17 748565-748683 (+)ykkC-yxkD748771-750220 (+)Thexy_0708

Xanthine/uracil/vitamin C permease		Thexy_0708Operon

DOOR ID: 1315488		Thexy_0715,
Thexy_0714,
Thexy_0713,
Thexy_0712,
Thexy_0711,
Thexy_0710,
Thexy_0709,
Thexy_0708		 View Structure
18 764785-764885 (-)SAM763685-764708 (-)Thexy_0723

Methionine import ATP-binding protein MetN 		Thexy_0723Operon

DOOR ID: 1315491		Thexy_0723,
Thexy_0722,
Thexy_0721		 View Structure
19 798209-798372 (+)ykoK798815-801503 (+)Thexy_0751

Magnesium-translocating P-type ATPase 		Thexy_0751Single gene

DOOR ID: 3138874		Thexy_0751 View Structure
20 819219-819265 (+)PreQ1819366-819855 (+)Thexy_0770

Thexy_0770Operon

DOOR ID: 1315501		Thexy_0771,
Thexy_0770		 View Structure
21 921110-921294 (+)cobalamin921328-923626 (+)Thexy_0868

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		Thexy_0868Single gene

DOOR ID: 3138924		Thexy_0868 View Structure
22 974077-974177 (-)glycine972835-973945 (-)Thexy_0920

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Thexy_0920Operon

DOOR ID: 1315529		Thexy_0920,
Thexy_0919,
Thexy_0918,
Thexy_0917		 View Structure
23 1075152-1075266 (+)TPP1075332-1076142 (+)Thexy_1002

Phosphomethylpyrimidine kinase 		Thexy_1002Operon

DOOR ID: 1315545		Thexy_1005,
Thexy_1004,
Thexy_1003,
Thexy_1002		 View Structure
24 1190511-1190639 (+)ydaO-yuaA1191527-1192091 (-)Thexy_1118

Thexy_1118Single gene

DOOR ID: 3139003		Thexy_1118 View Structure
25 1231285-1231367 (+)c-di-GMP-II1231394-1233089 (+)Thexy_1155

Type II secretion system protein E		Thexy_1155Operon

DOOR ID: 1315578		Thexy_1158,
Thexy_1157,
Thexy_1156,
Thexy_1155		 View Structure
26 1642133-1642263 (-)ydaO-yuaA1641433-1642129 (-)Thexy_1593

NLP/P60 protein		Thexy_1593Single gene

DOOR ID: 3139095		Thexy_1593 View Structure
27 1815057-1815156 (-)TPP1813637-1814942 (-)Thexy_1750

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Thexy_1750Operon

DOOR ID: 1315677		Thexy_1750,
Thexy_1749		 View Structure
28 1915659-1915753 (-)SAM1914701-1915604 (-)Thexy_1843

Methylenetetrahydrofolate reductase (0)		Thexy_1843Operon

DOOR ID: 1315697		Thexy_1843,
Thexy_1842		 View Structure
29 1972581-1972682 (-)SAM1971318-1972506 (-)Thexy_1900

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Thexy_1900Single gene

DOOR ID: 3139205		Thexy_1900 View Structure
30 2038442-2038614 (-)cobalamin2037346-2038297 (-)Thexy_1965

ABC-type transporter; periplasmic subunit		Thexy_1965Operon

DOOR ID: 1315718		Thexy_1965,
Thexy_1964,
Thexy_1963,
Thexy_1962,
Thexy_1961,
Thexy_1960,
Thexy_1959,
Thexy_1958,
Thexy_1957,
Thexy_1956,
Thexy_1955		 View Structure
31 2362885-2362968 (-)c-di-GMP-II2362395-2362740 (-)Thexy_2253

DNA polymerase beta domain protein region		Thexy_2253Operon

DOOR ID: 1315775		Thexy_2253,
Thexy_2252		 View Structure
32 2507945-2508107 (-)ykoK2506524-2507775 (-)Thexy_2384

MgtE intracellular region		Thexy_2384Operon

DOOR ID: 1315799		Thexy_2383,
Thexy_2384		 View Structure