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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
668603-668744
(-)
yybP-ykoY
668000-668561 (-)
ambt_02885
Putative manganese efflux pump MntP
ambt_02885
Single gene
DOOR ID:
3137135
ambt_02885
View Structure
2
2899217-2899326
(-)
TPP
2897062-2899162 (-)
ambt_12895
TonB-dependent receptor
ambt_12895
Operon
DOOR ID:
854035
ambt_12880,
ambt_12885,
ambt_12890,
ambt_12895
View Structure
3
3415940-3416156
(+)
cobalamin
3416207-3418136 (+)
ambt_15110
TonB-dependent receptor
ambt_15110
Single gene
DOOR ID:
3138122
ambt_15110
View Structure
4
4128579-4128692
(+)
TPP
4128849-4130787 (+)
ambt_18445
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ambt_18445
Operon
DOOR ID:
854251
ambt_18445,
ambt_18450,
ambt_18455,
ambt_18460,
ambt_18465,
ambt_18470
View Structure
Genome:
Alteromonas sp. SN2
(
NC_015554.1
);
Phylum:
Gammaproteobacteria
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