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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
200047-200162
(+)
fluoride
200202-201390 (+)
Trebr_0181
Sodium/hydrogen exchanger
Trebr_0181
Single gene
DOOR ID:
3127700
Trebr_0181
View Structure
2
802173-802315
(+)
purine
802379-802877 (+)
Trebr_0652
N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)
Trebr_0652
Operon
DOOR ID:
848083
Trebr_0652,
Trebr_0653,
Trebr_0654,
Trebr_0655,
Trebr_0656
View Structure
3
1024392-1024472
(+)
ZMP-ZTP
1024520-1026026 (+)
Trebr_0839
Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Trebr_0839
Single gene
DOOR ID:
3127918
Trebr_0839
View Structure
4
1213718-1213814
(+)
TPP
1213963-1214560 (-)
Trebr_1008
Transcriptional regulator; TetR family
Trebr_1008
Single gene
DOOR ID:
3127959
Trebr_1008
View Structure
5
1986419-1986495
(-)
TPP
1983747-1985403 (-)
Trebr_1682
ABC-type transporter; integral membrane subunit
Trebr_1682
Operon
DOOR ID:
848313
Trebr_1680,
Trebr_1681,
Trebr_1682,
Trebr_1683
View Structure
6
2911483-2911686
(-)
cobalamin
2909441-2911457 (-)
Trebr_2465
TonB-dependent receptor plug
Trebr_2465
Operon
DOOR ID:
848475
Trebr_2463,
Trebr_2464,
Trebr_2465
View Structure
Genome:
Treponema brennaborense DSM 12168
(
NC_015500.1
);
Phylum:
Spirochaetia
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