Genome: Verrucosispora maris AB-18-032 (NC_015434.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 79369-79502 (+)ydaO-yuaA79514-80555 (+)VAB18032_04880

NLP/P60 protein		VAB18032_04880Single gene

DOOR ID: 3117306		VAB18032_04880 View Structure
2 303179-303315 (+)AdoCbl303379-304315 (+)VAB18032_05990

Periplasmic binding protein		VAB18032_05990Operon

DOOR ID: 842038		VAB18032_05990,
VAB18032_05995,
VAB18032_06000		 View Structure
3 465603-465734 (-)ydaO-yuaA464585-465566 (-)VAB18032_06745

VAB18032_06745Single gene

DOOR ID: 3117464		VAB18032_06745 View Structure
4 1635798-1635863 (-)ykkC-III1635425-1635740 (-)VAB18032_12090

VAB18032_12090operon

DOOR ID: 842299		VAB18032_12085,
VAB18032_12090		 View Structure
5 2012308-2012450 (+)ydaO-yuaA2012587-2013460 (+)VAB18032_13820

VAB18032_13820Single gene

DOOR ID: 3118037		VAB18032_13820 View Structure
6 2287726-2287898 (+)FMN2288038-2289100 (+)VAB18032_15095

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		VAB18032_15095Operon

DOOR ID: 842433		VAB18032_15095,
VAB18032_15100,
VAB18032_15105,
VAB18032_15110,
VAB18032_15115 (ribH)		 View Structure
7 2398740-2398875 (+)cobalamin2398972-2400016 (+)VAB18032_15630

LPXTG-motif cell wall anchor domain-containing protein		VAB18032_15630Single gene

DOOR ID: 3118165		VAB18032_15630 View Structure
8 2400672-2400741 (+)cobalamin2400876-2402328 (+)VAB18032_15640

Cell wall anchor domain-containing protein		VAB18032_15640Operon

DOOR ID: 842460		VAB18032_15640,
VAB18032_15645,
VAB18032_15650,
VAB18032_15655,
VAB18032_15660		 View Structure
9 2552397-2552613 (+)cobalamin2552731-2553244 (+)VAB18032_16310

Thioesterase superfamily protein		VAB18032_16310Operon

DOOR ID: 842486		VAB18032_16310,
VAB18032_16315		 View Structure
10 2560447-2560567 (+)SAM-IV2560597-2561851 (+)VAB18032_16355

Aminotransferase class v		VAB18032_16355Single gene

DOOR ID: 3118215		VAB18032_16355 View Structure
11 2768645-2768857 (+)cobalamin2768970-2771208 (+)VAB18032_17165

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		VAB18032_17165Single gene

DOOR ID: 3118284		VAB18032_17165 View Structure
12 3036390-3036596 (+)cobalamin3036730-3039106 (+)VAB18032_18370

Ribonucleoside-diphosphate reductase 		VAB18032_18370Operon

DOOR ID: 842567		VAB18032_18370,
VAB18032_18375		 View Structure
13 3603545-3603643 (-)glycine3600643-3603466 (-)VAB18032_20770

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		VAB18032_20770Single gene

DOOR ID: 3118537		VAB18032_20770 View Structure
14 3889530-3889612 (-)ZMP-ZTP3888655-3889519 (-)VAB18032_21985

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]		VAB18032_21985Single gene

DOOR ID: 3118624		VAB18032_21985 View Structure
15 4020215-4020327 (+)SAM-IV4020610-4021471 (+)VAB18032_22560

Extracellular solute-binding protein family 3		VAB18032_22560Operon

DOOR ID: 842727		VAB18032_22560,
VAB18032_22565,
VAB18032_22570		 View Structure
16 4270548-4270637 (+)ZMP-ZTP4270655-4272092 (+)VAB18032_23730

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		VAB18032_23730Single gene

DOOR ID: 3118757		VAB18032_23730 View Structure
17 5181130-5181263 (+)ydaO-yuaA5181276-5182362 (+)VAB18032_27831

VAB18032_27831Single gene

DOOR ID: 3119092		VAB18032_27831 View Structure
18 5282023-5282128 (+)TPP5282198-5282789 (+)VAB18032_28276

VAB18032_28276Single gene

DOOR ID: 3119132		VAB18032_28276 View Structure
19 5897386-5897495 (-)TPP5895622-5896699 (-)VAB18032_00960

Glycine oxidase thio		VAB18032_00960Operon

DOOR ID: 843086		VAB18032_00950,
VAB18032_00955,
VAB18032_00960		 View Structure
20 6164284-6164419 (-)SAM6162987-6164274 (-)VAB18032_02300

Threonine synthase 		VAB18032_02300Single gene

DOOR ID: 3119460		VAB18032_02300 View Structure