About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
599966-600061
(+)
SAM
600134-601298 (+)
metK
S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
MLC_4720
Operon
DOOR ID:
841454
MLC_4720
(metK)
,
MLC_4730
(cut)
,
MLC_4750
(pmi)
,
MLC_4760
(ung)
,
MLC_4770
(cbf)
View Structure
2
918250-918340
(-)
TPP
916716-918195 (-)
phnD
Alkylphosphonate ABC transporter;substrate binding component
MLC_7330
Operon
DOOR ID:
841516
MLC_7310
(phnB)
,
MLC_7320
(phnC)
,
MLC_7330
(phnD)
View Structure
Genome:
Mycoplasma mycoides subsp. capri LC str. 95010
(
NC_015431.1
);
Phylum:
Tenericutes
a:3:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_015431.1";i:2;s:46:"Mycoplasma mycoides subsp. capri LC str. 95010";i:3;s:11:"Tenericutes";i:4;s:6:"544448";i:5;s:13:"599966-600061";i:6;s:1:"+";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:13:"600134-601298";i:10;s:1:"+";i:11;s:4:"metK";i:12;s:87:"S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)";i:13;s:8:"MLC_4720";i:14;s:6:"Operon";i:15;s:6:"841454";i:16;s:70:"MLC_4720(metK);MLC_4730(cut);MLC_4750(pmi);MLC_4760(ung);MLC_4770(cbf)";i:17;s:97:"one-carbon metabolic process [GO:0006730]; S-adenosylmethionine biosynthetic process [GO:0006556]";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_015431.1";i:2;s:46:"Mycoplasma mycoides subsp. capri LC str. 95010";i:3;s:11:"Tenericutes";i:4;s:6:"544448";i:5;s:13:"918250-918340";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"916716-918195";i:10;s:1:"-";i:11;s:4:"phnD";i:12;s:60:"Alkylphosphonate ABC transporter;substrate binding component";i:13;s:8:"MLC_7330";i:14;s:6:"Operon";i:15;s:6:"841516";i:16;s:44:"MLC_7310(phnB);MLC_7320(phnC);MLC_7330(phnD)";i:17;s:0:"";i:18;s:15:"View Structure ";}}