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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
544551-544616
(-)
fluoride
542795-544529 (-)
Hipma_0539
Dynamin family protein
Hipma_0539
Single gene
DOOR ID:
3095878
Hipma_0539
View Structure
2
586278-586400
(+)
MOCO
586440-587199 (+)
Hipma_0578
Hipma_0578
Operon
DOOR ID:
829545
Hipma_0578,
Hipma_0579,
Hipma_0580
View Structure
3
1134868-1135054
(+)
cobalamin
1135137-1138125 (+)
Hipma_1143
Anaerobic ribonucleoside-triphosphate reductase
Hipma_1143
Single gene
DOOR ID:
3095949
Hipma_1143
View Structure
4
1302749-1302816
(+)
fluoride
1302833-1303784 (+)
Hipma_1312
Respiratory-chain NADH dehydrogenase subunit 1
Hipma_1312
Operon
DOOR ID:
829673
Hipma_1312,
Hipma_1313,
Hipma_1314,
Hipma_1315,
Hipma_1316,
Hipma_1317
View Structure
5
1309390-1309508
(+)
MOCO
1309564-1310305 (+)
Hipma_1318
Extracellular solute-binding protein family 1
Hipma_1318
Operon
DOOR ID:
829674
Hipma_1318,
Hipma_1319
View Structure
6
1569996-1570184
(+)
cobalamin
1570237-1571560 (+)
Hipma_1600
Cobyrinic acid a;c-diamide synthase
Hipma_1600
Operon
DOOR ID:
829724
Hipma_1600,
Hipma_1601,
Hipma_1602,
Hipma_1603,
Hipma_1604,
Hipma_1605,
Hipma_1606,
Hipma_1607,
Hipma_1608
View Structure
Genome:
Hippea maritima DSM 10411
(
NC_015318.1
);
Phylum:
delta/epsilon subdivisions
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