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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
261881-262098
(+)
FMN
262251-262815 (+)
SOR_0279
Riboflavin transporter
SOR_0279
Operon
DOOR ID:
826691
SOR_0277,
SOR_0278,
SOR_0279,
SOR_0280
View Structure
2
436880-436975
(-)
purine
436177-436759 (-)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
SOR_0461
Operon
DOOR ID:
826723
SOR_0460,
SOR_0461
(xpt)
View Structure
3
1356972-1357070
(+)
TPP
1357152-1357944 (+)
SOR_1401
Phosphomethylpyrimidine kinase
SOR_1401
Single gene
DOOR ID:
3091491
SOR_1401
View Structure
4
1363408-1363496
(-)
TPP
1362688-1363249 (-)
SOR_1408
ABC transporter membrane-spanning permease-cobalt transport
SOR_1408
Operon
DOOR ID:
826926
SOR_1406,
SOR_1407,
SOR_1408
View Structure
5
1364507-1364595
(-)
TPP
1363619-1364288 (-)
SOR_1409
Aminopyrimidine aminohydrolase
SOR_1409
Single gene
DOOR ID:
3091492
SOR_1409
View Structure
6
1570411-1570499
(-)
glycine
1568999-1570322 (-)
SOR_1615
Sodium:alanine symporter family protein
SOR_1615
Single gene
DOOR ID:
3091555
SOR_1615
View Structure
7
1762950-1763101
(-)
ykoK
1760092-1762753 (-)
mgtA
Cation transporting ATPase
SOR_1802
Single gene
DOOR ID:
3091603
SOR_1802
(mgtA)
View Structure
8
1905766-1905868
(-)
TPP
1905403-1905694 (-)
SOR_1939
SOR_1939
Operon
DOOR ID:
827040
SOR_1936
(tauB)
,
SOR_1937
(tauA)
,
SOR_1938
(tauC)
,
SOR_1939
View Structure
Genome:
Streptococcus oralis Uo5
(
NC_015291.1
);
Phylum:
Firmicutes
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