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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
186490-186555
(+)
fluoride
186626-187910 (+)
Sph21_0179
Cl-channel voltage-gated family protein
Sph21_0179
Single gene
DOOR ID:
3088449
Sph21_0179
View Structure
2
421365-421467
(+)
SAM
421567-425260 (+)
Sph21_0379
Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Sph21_0379
Single gene
DOOR ID:
3088531
Sph21_0379
View Structure
3
1561460-1561604
(-)
TPP
1558880-1561388 (-)
Sph21_1248
TonB-dependent receptor
Sph21_1248
Single gene
DOOR ID:
3088901
Sph21_1248
View Structure
4
1716879-1716973
(-)
TPP
1716632-1716833 (-)
Sph21_1388
Thiamine biosynthesis protein ThiS
Sph21_1388
Operon
DOOR ID:
825470
Sph21_1382,
Sph21_1383,
Sph21_1384,
Sph21_1385,
Sph21_1386,
Sph21_1387,
Sph21_1388
View Structure
5
2155618-2155723
(+)
SAM
2155821-2158959 (+)
Sph21_1772
TonB-dependent receptor plug
Sph21_1772
Single gene
DOOR ID:
3089108
Sph21_1772
View Structure
6
2643535-2643629
(+)
TPP
2643698-2644265 (+)
Sph21_2155
CDP-alcohol phosphatidyltransferase
Sph21_2155
Single gene
DOOR ID:
3089250
Sph21_2155
View Structure
7
4174871-4174979
(+)
SAM
4175147-4176539 (+)
Sph21_3381
O-acetylhomoserine/O-acetylserine sulfhydrylase (7)
Sph21_3381
Operon
DOOR ID:
825881
Sph21_3381,
Sph21_3382,
Sph21_3383
View Structure
8
4460433-4460623
(-)
cobalamin
4459470-4460331 (-)
Sph21_3651
Putative cell surface protein
Sph21_3651
Operon
DOOR ID:
825933
Sph21_3649,
Sph21_3650,
Sph21_3651
View Structure
9
6211110-6211312
(-)
cobalamin
6208646-6210968 (-)
Sph21_5265
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Sph21_5265
Single gene
DOOR ID:
3090493
Sph21_5265
View Structure
Genome:
Sphingobacterium sp. 21
(
NC_015277.1
);
Phylum:
Bacteroidetes/Chlorobi group
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