RiboswitchDB

Genome: Cellulophaga lytica DSM 7489 (NC_015167.1); Phylum: Bacteroidetes/Chlorobi group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

155399-155607 (-)

cobalamin

153440-155306 (-)

Celly_0153

TonB-dependent receptor plug

Single gene

DOOR ID: 3069410

Celly_0153

2

1119439-1119533 (-)

TPP

1117100-1119326 (-)

Celly_1007

TonB-dependent receptor

Single gene

DOOR ID: 3069671

Celly_1007

3

2099482-2099575 (-)

TPP

2099163-2099367 (-)

Celly_1872

Thiamine biosynthesis protein ThiS

Operon

DOOR ID: 816125

Celly_1871,
Celly_1872

4

2207035-2207148 (+)

SAM

2207285-2208575 (+)

Celly_1964

O-acetylhomoserine/O-acetylserine sulfhydrylase (9)

Operon

DOOR ID: 816146

Celly_1964,
Celly_1965

5

2222170-2222286 (+)

SAM

2222372-2223491 (+)

Celly_1976

Methionine synthase (3)

Operon

DOOR ID: 816149

Celly_1976,
Celly_1977,
Celly_1978

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";}}