Genome: Odoribacter splanchnicus DSM 20712 (NC_015160.1); Phylum: Bacteroidetes/Chlorobi group
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 749393-749489 (-)TPP749137-749338 (-)Odosp_0634

Thiamine biosynthesis protein ThiS
Odosp_0634Single gene

DOOR ID: 3066422
Odosp_0634 View Structure
2 2433755-2433942 (+)cobalamin2434079-2435120 (+)Odosp_2042

Odosp_2042Operon

DOOR ID: 814077
Odosp_2042,
Odosp_2043,
Odosp_2044,
Odosp_2045
View Structure
3 2447151-2447352 (-)cobalamin2445845-2446862 (-)Odosp_2051

Odosp_2051Operon

DOOR ID: 814079
Odosp_2050,
Odosp_2051
View Structure
4 2451938-2452140 (-)cobalamin2450707-2451811 (-)Odosp_2055

Methionine synthase vitamin-B12 independent
Odosp_2055Operon

DOOR ID: 814080
Odosp_2053,
Odosp_2054,
Odosp_2055
View Structure
5 2452365-2452569 (-)cobalamin2450707-2451811 (-)Odosp_2055

Methionine synthase vitamin-B12 independent
Odosp_2055Operon

DOOR ID: 814080
Odosp_2053,
Odosp_2054,
Odosp_2055
View Structure
6 2460284-2460488 (-)cobalamin2458543-2460007 (-)Odosp_2062

Vinylacetyl-CoA Delta-isomerase
Odosp_2062Operon

DOOR ID: 814081
Odosp_2059,
Odosp_2060,
Odosp_2061,
Odosp_2062
View Structure
7 2460848-2461034 (+)cobalamin2461250-2462792 (+)Odosp_2063

Propionyl-CoA carboxylase
Odosp_2063Operon

DOOR ID: 814082
Odosp_2063,
Odosp_2064,
Odosp_2065,
Odosp_2066,
Odosp_2067
View Structure
8 2884372-2884562 (+)cobalamin2884585-2885728 (+)Odosp_2413

Periplasmic binding protein
Odosp_2413Operon

DOOR ID: 814157
Odosp_2413,
Odosp_2414,
Odosp_2415
View Structure
9 2903105-2903299 (-)cobalamin2901607-2903098 (-)Odosp_2427

Odosp_2427Operon

DOOR ID: 814160
Odosp_2426,
Odosp_2427
View Structure
10 2904689-2904884 (-)cobalamin2903579-2904500 (-)Odosp_2428

Sirohydrochlorin cobaltochelatase
Odosp_2428Single gene

DOOR ID: 3066930
Odosp_2428 View Structure
11 2922965-2923167 (-)cobalamin2920612-2922859 (-)Odosp_2441

TonB-dependent receptor
Odosp_2441Single gene

DOOR ID: 3066933
Odosp_2441 View Structure
12 2927143-2927336 (-)cobalamin2924883-2927088 (-)Odosp_2445

TonB-dependent receptor
Odosp_2445Operon

DOOR ID: 814164
Odosp_2442,
Odosp_2443,
Odosp_2444,
Odosp_2445
View Structure
13 2966306-2966510 (-)cobalamin2963863-2965987 (-)Odosp_2474

TonB-dependent receptor plug
Odosp_2474Operon

DOOR ID: 814171
Odosp_2473,
Odosp_2474
View Structure
14 3053764-3053961 (-)cobalamin3051458-3053666 (-)Odosp_2541

Anaerobic ribonucleoside-triphosphate reductase
Odosp_2541Operon

DOOR ID: 814187
Odosp_2540,
Odosp_2541
View Structure
15 3060750-3060953 (+)cobalamin3061026-3061203 (+)Odosp_2549

Odosp_2549Single gene

DOOR ID: 3066961
Odosp_2549 View Structure
16 3302983-3303175 (+)cobalamin3303333-3304299 (+)Odosp_2774

Odosp_2774Single gene

DOOR ID: 3067014
Odosp_2774 View Structure
17 4073622-4073726 (-)SAM4073502-4073607 (-)Odosp_3420

Odosp_3420Single gene

DOOR ID: 3067192
Odosp_3420 View Structure
18 4137394-4137513 (+)FMN4137520-4138714 (+)Odosp_3470

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Odosp_3470Operon

DOOR ID: 814389
Odosp_3470,
Odosp_3471,
Odosp_3472,
Odosp_3473
View Structure
19 4335380-4335572 (-)cobalamin4334307-4335225 (-)Odosp_3637

Odosp_3637Single gene

DOOR ID: 3067253
Odosp_3637 View Structure