Genome: Burkholderia sp. CCGE1001 chromosome II (NC_015137.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 21472-21564 (+)glycine21736-22948 (+)BC1001_3623

D-amino-acid dehydrogenase
BC1001_3623Single gene

DOOR ID: 3059395
BC1001_3623 View Structure
2 98349-98540 (+)cobalamin98565-100284 (+)BC1001_3690

Precorrin-3B synthase
BC1001_3690Operon

DOOR ID: 809410
BC1001_3690,
BC1001_3691,
BC1001_3692,
BC1001_3693
View Structure
3 1023144-1023256 (+)ykkC-yxkD1023314-1024382 (+)BC1001_4518

ABC transporter periplasmic binding protein; urea carboxylase region
BC1001_4518Operon

DOOR ID: 809557
BC1001_4518,
BC1001_4519,
BC1001_4520,
BC1001_4521,
BC1001_4522,
BC1001_4523,
BC1001_4524,
BC1001_4525
View Structure
4 1027518-1027562 (+)mini-ykkC1027565-1031207 (+)BC1001_4524

BC1001_4524Operon

DOOR ID: 809557
BC1001_4518,
BC1001_4519,
BC1001_4520,
BC1001_4521,
BC1001_4522,
BC1001_4523,
BC1001_4524,
BC1001_4525
View Structure
5 1664956-1665020 (+)cobalamin1665083-1665305 (+)BC1001_5081

BC1001_5081Operon

DOOR ID: 809661
BC1001_5081,
BC1001_5082
View Structure
6 2487330-2487569 (-)cobalamin2486296-2487091 (-)BC1001_5805

Uroporphyrin-III C-methyltransferase
BC1001_5805Operon

DOOR ID: 809792
BC1001_5801,
BC1001_5802,
BC1001_5803,
BC1001_5804,
BC1001_5805
View Structure
7 2487639-2487919 (+)cobalamin2488084-2489179 (+)BC1001_5806

Cobalamin biosynthesis protein CobW
BC1001_5806Operon

DOOR ID: 809793
BC1001_5806,
BC1001_5807,
BC1001_5808,
BC1001_5809
View Structure