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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
148522-148618
(+)
TPP
148665-150018 (+)
BLIF_0114
Xanthine/uracil transport protein
BLIF_0114
Operon
DOOR ID:
806104
BLIF_0114,
BLIF_0115,
BLIF_0116
View Structure
2
698245-698314
(-)
fluoride
697645-698182 (-)
BLIF_0540
Putative fluoride ion transporter CrcB
BLIF_0540
Operon
DOOR ID:
806184
BLIF_0539,
BLIF_0540
View Structure
3
722601-722705
(+)
TPP
722809-723409 (+)
BLIF_0564
BLIF_0564
Operon
DOOR ID:
806189
BLIF_0564,
BLIF_0565,
BLIF_0566
View Structure
4
740742-740845
(+)
TPP
741019-741214 (+)
BLIF_0580
BLIF_0580
Operon
DOOR ID:
806192
BLIF_0580,
BLIF_0581,
BLIF_0582,
BLIF_0583
View Structure
5
1115244-1115375
(+)
TPP
1115871-1116504 (-)
BLIF_0932
Putative esterase
BLIF_0932
Single gene
DOOR ID:
3051302
BLIF_0932
View Structure
6
1603279-1603387
(+)
TPP
1604404-1607158 (+)
BLIF_1377
Multifunctional fusion protein [Includes: Phosphomethylpyrimidine synthase (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)]
BLIF_1377
Single gene
DOOR ID:
3051475
BLIF_1377
View Structure
7
1690431-1690582
(+)
FMN
1690588-1691242 (+)
BLIF_1450
Riboflavin transporter
BLIF_1450
Single gene
DOOR ID:
3051523
BLIF_1450
View Structure
Genome:
Bifidobacterium longum subsp. infantis 157F
(
NC_015052.1
);
Phylum:
Actinobacteria
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