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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
374272-374366
(+)
TPP
374387-375422 (+)
TSC_c04280
ABC transporter
TSC_c04280
Operon
DOOR ID:
804798
TSC_c04280,
TSC_c04290
View Structure
2
872039-872159
(+)
FMN
873294-873879 (+)
ribE
Riboflavin synthase; subunit alpha
TSC_c09200
Operon
DOOR ID:
804918
TSC_c09190
(ribD)
,
TSC_c09200
(ribE)
,
TSC_c09210
(ribBA)
View Structure
3
1044224-1044286
(+)
fluoride
1044329-1045499 (+)
TSC_c10960
Na+/H+ antiporter
TSC_c10960
Operon
DOOR ID:
804958
TSC_c10960,
TSC_c10970,
TSC_c10980,
TSC_c10990,
TSC_c11000,
TSC_c11010,
TSC_c11020
View Structure
4
1120397-1120506
(+)
TPP
1120600-1121221 (+)
thiE
Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
TSC_c11800
Operon
DOOR ID:
804976
TSC_c11800
(thiE)
,
TSC_c11810
(thiS)
,
TSC_c11820
(thiG)
View Structure
5
1150534-1150665
(+)
cobalamin
1150857-1151241 (+)
TSC_c12090
Acyl-CoA hydrolase
TSC_c12090
Operon
DOOR ID:
804982
TSC_c12090,
TSC_c12100
(nrdB1)
,
TSC_c12110
(nrdA)
View Structure
6
1293419-1293555
(+)
SAM
1293685-1294951 (+)
metB2
O-acetylhomoserine (Thiol)-lyase
TSC_c13440
Operon
DOOR ID:
805011
TSC_c13440
(metB2)
,
TSC_c13450
(metX)
View Structure
7
1321323-1321495
(-)
yybP-ykoY
1320409-1320658 (-)
TSC_c13700
TSC_c13700
Operon
DOOR ID:
805018
TSC_c13700,
TSC_c13710
View Structure
8
1422378-1422538
(-)
cobalamin
1421388-1422243 (-)
TSC_c14780
Iron ABC transporter; substrate-binding protein
TSC_c14780
Operon
DOOR ID:
805041
TSC_c14750,
TSC_c14760
(fepC)
,
TSC_c14770
(fecD)
,
TSC_c14780
View Structure
9
1475800-1475923
(+)
MOCO
1476796-1477471 (+)
modB
Molybdate ABC transporter; permease protein
TSC_c15370
Operon
DOOR ID:
805054
TSC_c15360
(modA)
,
TSC_c15370
(modB)
,
TSC_c15380
View Structure
10
1638487-1638571
(+)
c-di-GMP-II
1638838-1639360 (-)
TSC_c17270
Transposase family protein
TSC_c17270
Operon
DOOR ID:
805098
TSC_c17270,
TSC_c17280
View Structure
11
1638632-1638717
(+)
c-di-GMP-II
1638838-1639360 (-)
TSC_c17270
Transposase family protein
TSC_c17270
Operon
DOOR ID:
805098
TSC_c17270,
TSC_c17280
View Structure
12
1792129-1792216
(-)
c-di-GMP-II
1791497-1792112 (-)
TSC_c18860
TSC_c18860
Operon
DOOR ID:
805132
TSC_c18830,
TSC_c18840,
TSC_c18850,
TSC_c18860,
TSC_c18870
View Structure
13
1792694-1792779
(-)
c-di-GMP-II
1792256-1792601 (-)
TSC_c18870
TSC_c18870
Operon
DOOR ID:
805132
TSC_c18830,
TSC_c18840,
TSC_c18850,
TSC_c18860,
TSC_c18870
View Structure
14
1792844-1792927
(-)
c-di-GMP-II
1792256-1792601 (-)
TSC_c18870
TSC_c18870
Operon
DOOR ID:
805132
TSC_c18830,
TSC_c18840,
TSC_c18850,
TSC_c18860,
TSC_c18870
View Structure
Genome:
Thermus scotoductus SA-01
(
NC_014974.1
);
Phylum:
Deinococcus-Thermus
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