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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1495123-1495218
(-)
TPP
1492794-1495089 (-)
Bache_1172
TonB-dependent receptor
Bache_1172
Operon
DOOR ID:
796423
Bache_1170,
Bache_1171,
Bache_1172
View Structure
2
2195416-2195619
(+)
cobalamin
2195682-2197680 (+)
Bache_1756
TonB-dependent receptor
Bache_1756
Operon
DOOR ID:
796558
Bache_1756,
Bache_1757,
Bache_1758,
Bache_1759
View Structure
3
2489249-2489466
(+)
cobalamin
2489527-2490493 (+)
Bache_2030
Bache_2030
Single gene
DOOR ID:
3034671
Bache_2030
View Structure
4
2713483-2713750
(-)
cobalamin
2711189-2713430 (-)
Bache_2222
TonB-dependent receptor
Bache_2222
Operon
DOOR ID:
796654
Bache_2220,
Bache_2221,
Bache_2222
View Structure
5
2713845-2714045
(+)
cobalamin
2714254-2716588 (+)
Bache_2224
TonB-dependent receptor
Bache_2224
Single gene
DOOR ID:
3034718
Bache_2224
View Structure
6
2719964-2720166
(-)
cobalamin
2717808-2719902 (-)
Bache_2226
TonB-dependent receptor
Bache_2226
Operon
DOOR ID:
796655
Bache_2225,
Bache_2226
View Structure
7
2720298-2720506
(+)
cobalamin
2720684-2722196 (+)
Bache_2227
Biotin carboxylase (4)
Bache_2227
Operon
DOOR ID:
796656
Bache_2227,
Bache_2228,
Bache_2229
View Structure
8
2859975-2860190
(+)
cobalamin
2860256-2862776 (+)
Bache_2351
Ribonucleoside-diphosphate reductase
Bache_2351
Operon
DOOR ID:
796690
Bache_2351,
Bache_2352
View Structure
9
2871854-2871944
(+)
TPP
2872020-2872218 (+)
Bache_2360
Sulfur carrier protein ThiS
Bache_2360
Operon
DOOR ID:
796692
Bache_2360,
Bache_2361,
Bache_2362
View Structure
10
3504550-3504752
(+)
cobalamin
3504994-3505585 (-)
Bache_2945
Siderophore (Surfactin) biosynthesis regulatory protein
Bache_2945
Operon
DOOR ID:
796818
Bache_2945,
Bache_2946,
Bache_2947,
Bache_2948
View Structure
Genome:
Bacteroides helcogenes P 36-108
(
NC_014933.1
);
Phylum:
Bacteroidetes/Chlorobi group
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